Lineage for d2xx8b_ (2xx8 B:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1879042Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 1879043Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 1879044Family c.94.1.1: Phosphate binding protein-like [53851] (43 proteins)
  6. 1879268Protein Glutamate receptor ligand binding core [53881] (5 species)
  7. 1879277Species Norway rat (Rattus norvegicus), GluR2 [TaxId:10116] [53882] (134 PDB entries)
  8. 1879301Domain d2xx8b_: 2xx8 B: [170459]
    automated match to d1lbcb_
    complexed with 1ne, glu, so4, zn

Details for d2xx8b_

PDB Entry: 2xx8 (more details), 1.55 Å

PDB Description: crystal structure of n,n-dimethyl-4-(3-(trifluoromethyl)-4, 5,6,7-tetrahydro-1h-indazol-1-yl)benzamide in complex with the ligand binding domain of the rat glua2 receptor and glutamate at 2.2a resolution.
PDB Compounds: (B:) Glutamate receptor 2

SCOPe Domain Sequences for d2xx8b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2xx8b_ c.94.1.1 (B:) Glutamate receptor ligand binding core {Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]}
nktvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgkyg
ardadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkgtpie
saedlskqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvarvr
kskgkyayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslgnavnlavlkls
eqglldklknkwwydkgecg

SCOPe Domain Coordinates for d2xx8b_:

Click to download the PDB-style file with coordinates for d2xx8b_.
(The format of our PDB-style files is described here.)

Timeline for d2xx8b_: