SCOPe 2.05: Domain d1baja_: 1baj A:

Lineage for d1baja_ (1baj A:)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
   4 helices, bundle; helix 3 is shorter than others; up-and-down

4. Superfamily a.28.3: Retrovirus capsid dimerization domain-like [47353] (3 families)

5. Family a.28.3.1: Retrovirus capsid protein C-terminal domain [47354] (5 proteins)

6. Protein HIV capsid protein, dimerisation domain [47359] (1 species)

7. Species Human immunodeficiency virus type 1 [TaxId:11676] [47360] (14 PDB entries)

8. Domain d1baja_: 1baj A: [16954]
   extended at the C-terminus to include a 14-residue GAG p2 domain

Details for d1baja_

PDB Entry: 1baj, 2.6 Å

PDB Description: hiv-1 capsid protein c-terminal fragment plus gag p2 domain

PDB Compounds: (A:) gag polyprotein

SCOPe Domain Sequences for d1baja_:

Sequence; same for both SEQRES and ATOM records:

>d1baja_ a.28.3.1 (A:) HIV capsid protein, dimerisation domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
tsildirqgpkepfrdyvdrfyktlraeqasqevknwmtetllvqnanpdcktilkalgp
gatleemmtac

Timeline for d1baja_:

• d1baja_ first appeared (with stable ids) in SCOP 1.55, called d1baj__
  
• d1baja_ appears in SCOPe 2.04
  
• d1baja_ appears in SCOPe 2.06
  
• d1baja_ appears in the current release, SCOPe 2.08