Lineage for d1baja_ (1baj A:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2316392Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
    4 helices, bundle; helix 3 is shorter than others; up-and-down
  4. 2316654Superfamily a.28.3: Retrovirus capsid dimerization domain-like [47353] (3 families) (S)
  5. 2316655Family a.28.3.1: Retrovirus capsid protein C-terminal domain [47354] (5 protein domains)
  6. 2316661Protein HIV capsid protein, dimerisation domain [47359] (2 species)
  7. 2316665Species Human immunodeficiency virus type 1 [TaxId:11676] [47360] (15 PDB entries)
  8. 2316676Domain d1baja_: 1baj A: [16954]
    extended at the C-terminus to include a 14-residue GAG p2 domain

Details for d1baja_

PDB Entry: 1baj (more details), 2.6 Å

PDB Description: hiv-1 capsid protein c-terminal fragment plus gag p2 domain
PDB Compounds: (A:) gag polyprotein

SCOPe Domain Sequences for d1baja_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1baja_ a.28.3.1 (A:) HIV capsid protein, dimerisation domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
tsildirqgpkepfrdyvdrfyktlraeqasqevknwmtetllvqnanpdcktilkalgp
gatleemmtac

SCOPe Domain Coordinates for d1baja_:

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Timeline for d1baja_: