SCOPe 2.05: Domain d2wo5d_: 2wo5 D:

Lineage for d2wo5d_ (2wo5 D:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.1: Class I aldolase [51570] (13 proteins)
   the catalytic lysine forms schiff-base intermediate with substrate
   possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels

6. Protein automated matches [190095] (20 species)
   not a true protein

7. Species Escherichia coli [TaxId:469008] [189446] (6 PDB entries)

8. Domain d2wo5d_: 2wo5 D: [169508]
   automated match to d1hl2a_

Details for d2wo5d_

PDB Entry: 2wo5, 2.2 Å

PDB Description: structure of wild type e. coli n-acetylneuraminic acid lyase in space group p21 crystal form i

PDB Compounds: (D:) n-acetylneuraminate lyase

SCOPe Domain Sequences for d2wo5d_:

Sequence; same for both SEQRES and ATOM records:

>d2wo5d_ c.1.10.1 (D:) automated matches {Escherichia coli [TaxId: 469008]}
atnlrgvmaalltpfdqqqaldkaslrrlvqfniqqgidglyvggstgeafvqslsereq
vleivaeeakgkikliahvgcvstaesqqlaasakrygfdavsavtpfyypfsfeehcdh
yraiidsadglpmvvynipalsgvkltldqintlvtlpgvgalkqtsgdlyqmeqirreh
pdlvlyngydeifasgllagadggigstynimgwryqgivkalkegdiqtaqklqtecnk
vidlliktgvfrglktvlhymdvvsvplcrkpfgpvdekylpelkalaqqlmqe

Timeline for d2wo5d_:

• d2wo5d_ first appeared in SCOPe 2.01
  
• d2wo5d_ appears in SCOPe 2.04
  
• d2wo5d_ appears in SCOPe 2.06
  
• d2wo5d_ appears in the current release, SCOPe 2.08