SCOPe 2.06: Domain d1ffya1: 1ffy A:645-917

Lineage for d1ffya1 (1ffy A:645-917)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.27: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases [47322] (1 superfamily)
   core: 4 helices; bundle; one loop crosses over one side of the bundle

4. Superfamily a.27.1: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases [47323] (2 families)

5. Family a.27.1.1: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases [47324] (6 proteins)

6. Protein Isoleucyl-tRNA synthetase (IleRS) [47328] (2 species)

7. Species Staphylococcus aureus [TaxId:1280] [47330] (3 PDB entries)
   contains additional alpha+beta and Zn-binding domains in the C-terminal extension

8. Domain d1ffya1: 1ffy A:645-917 [16926]
   Other proteins in same PDB: d1ffya2, d1ffya3
   protein/RNA complex; complexed with k, mg, mrc, zn

Details for d1ffya1

PDB Entry: 1ffy, 2.2 Å

PDB Description: insights into editing from an ile-trna synthetase structure with trna(ile) and mupirocin

PDB Compounds: (A:) isoleucyl-tRNA synthetase

SCOPe Domain Sequences for d1ffya1:

Sequence; same for both SEQRES and ATOM records:

>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]}
yrkirntlrfmlgnindfnpdtdsipesellevdryllnrlreftastinnyenfdylni
yqevqnfinvelsnfyldygkdilyieqrdshirrsmqtvlyqilvdmtkllapilvhta
eevwshtphvkeesvhladmpkvvevdqalldkwrtfmnlrddvnraletarnekvigks
leakvtiasndkfnasefltsfdalhqlfivsqvkvvdklddqatayehgdiviehadge
kcercwnysedlgavdelthlcprcqqvvkslv

Timeline for d1ffya1:

• d1ffya1 first appeared (with stable ids) in SCOP 1.55
  
• d1ffya1 appears in SCOPe 2.05
  
• d1ffya1 appears in SCOPe 2.07
  
• d1ffya1 appears in the current release, SCOPe 2.08