Lineage for d2wdtb1 (2wdt B:1-75)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 protein domains)
    Pfam PF00240
  6. 2501389Protein Ubiquitin [54238] (8 species)
  7. 2501491Species Human (Homo sapiens) [TaxId:9606] [54239] (220 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2501621Domain d2wdtb1: 2wdt B:1-75 [169256]
    Other proteins in same PDB: d2wdta_, d2wdtb2, d2wdtc_, d2wdtd2
    automated match to d1uzxb_
    complexed with cl

Details for d2wdtb1

PDB Entry: 2wdt (more details), 2.3 Å

PDB Description: crystal structure of plasmodium falciparum uchl3 in complex with the suicide inhibitor ubvme
PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d2wdtb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2wdtb1 d.15.1.1 (B:1-75) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg

SCOPe Domain Coordinates for d2wdtb1:

Click to download the PDB-style file with coordinates for d2wdtb1.
(The format of our PDB-style files is described here.)

Timeline for d2wdtb1: