SCOPe 2.06: Domain d2vsib_: 2vsi B:

Lineage for d2vsib_ (2vsi B:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.0: automated matches [191551] (1 protein)
   not a true family

6. Protein automated matches [190951] (26 species)
   not a true protein

7. Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [188718] (2 PDB entries)

8. Domain d2vsib_: 2vsi B: [168789]
   automated match to d1vpaa_
   complexed with ca, cdf

Details for d2vsib_

PDB Entry: 2vsi, 2.75 Å

PDB Description: synthesis of cdp-activated ribitol for teichoic acid precursors in streptococcus pneumoniae

PDB Compounds: (B:) 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase

SCOPe Domain Sequences for d2vsib_:

Sequence, based on SEQRES records:

>d2vsib_ c.68.1.0 (B:) automated matches {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
hmiyagilaggtgtrmgisnlpkqflelgdrpilihtiekfvlepsiekivvgvhgdwvs
haedlvdkylplykeriiitkggadrntsikniieaidayrpltpedivvthdsvrpfit
lrmiqdniqlaqnhdavdtvveavdtivestngqfitdipnrahlyqgqtpqtfrckdfm
dlygslsdeekeiltdackifvikgkdvalakgeysnlkittvtdlkiaksmi

Sequence, based on observed residues (ATOM records):

>d2vsib_ c.68.1.0 (B:) automated matches {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
hmiyagilaggtgtlpkqflelgdrpilihtiekfvlepsiekivvgvhgdwvshaedlv
dkylplykeriiitkggadrntsikniieaidayrpltpedivvthdsvrpfitlrmiqd
niqlaqnhdavdtvveavdtivestngqfitdipnrahlyqgqtpqtfrckdfmdlygsl
sdeekeiltdackifvikgkdvalakgeysnlkittvtdlkiaksmi

Timeline for d2vsib_:

• d2vsib_ first appeared in SCOPe 2.01
  
• d2vsib_ appears in SCOPe 2.05
  
• d2vsib_ appears in SCOPe 2.07
  
• d2vsib_ appears in the current release, SCOPe 2.08