SCOPe 2.06: Domain d2vgua_: 2vgu A:

Lineage for d2vgua_ (2vgu A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins)
   formerly omega-Aminoacid:pyruvate aminotransferase-like

6. Protein Serine hydroxymethyltransferase [53429] (6 species)

7. Species Bacillus stearothermophilus [TaxId:1422] [75272] (39 PDB entries)

8. Domain d2vgua_: 2vgu A: [168594]
   automated match to d1kkja_
   complexed with mpd, plp, po4, ser

Details for d2vgua_

PDB Entry: 2vgu, 1.8 Å

PDB Description: crystal structure of e53qbsshmt with l-serine

PDB Compounds: (A:) serine hydroxymethyltransferase

SCOPe Domain Sequences for d2vgua_:

Sequence; same for both SEQRES and ATOM records:

>d2vgua_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
mkylpqqdpqvfaaieqerkrqhakieliasenfvsravmeaqgsvltnkyaqgypgrry
yggceyvdiveelarerakqlfgaehanvqphsgaqanmavyftvlehgdtvlgmnlshg
ghlthgspvnfsgvqynfvaygvdpethvidyddvrekarlhrpklivaaasaypriidf
akfreiadevgaylmvdmahiaglvaaglhpnpvpyahfvtttthktlrgprggmilcqe
qfakqidkaifpgiqggplmhviaakavafgealqddfkayakrvvdnakrlasalqneg
ftlvsggtdnhlllvdlrpqqltgktaekvldevgitvnkntipydpespfvtsgirigt
aavttrgfgleemdeiaaiiglvlknvgseqaleearqrvaaltdg

Timeline for d2vgua_:

• d2vgua_ first appeared in SCOPe 2.01
  
• d2vgua_ appears in SCOPe 2.05
  
• d2vgua_ appears in SCOPe 2.07
  
• d2vgua_ appears in the current release, SCOPe 2.08