SCOPe 2.06: Domain d2rj4a1: 2rj4 A:64-352

Lineage for d2rj4a1 (2rj4 A:64-352)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.9: alpha-1,3-galactosyltransferase-like [64131] (4 proteins)
   automatically mapped to Pfam PF03414

6. Protein Glycosyltransferase A catalytic domain [75276] (1 species)
   involved in blood group antigen biosynthesis

7. Species Human (Homo sapiens) [TaxId:9606] [75277] (53 PDB entries)
   Uniprot P16442 64-345

8. Domain d2rj4a1: 2rj4 A:64-352 [168149]
   Other proteins in same PDB: d2rj4a2
   automated match to d1lz0a_
   complexed with ad7, mn, udp

Details for d2rj4a1

PDB Entry: 2rj4, 1.47 Å

PDB Description: b-specific alpha-1,3-galactosyltransferase g176r +udp+ada

PDB Compounds: (A:) Glycoprotein-fucosylgalactoside alpha-galactosyltransferase

SCOPe Domain Sequences for d2rj4a1:

Sequence, based on SEQRES records:

>d2rj4a1 c.68.1.9 (A:64-352) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevraykrwqd
vsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssrea
ftyerrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwhde
shlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavpknhqavr

Sequence, based on observed residues (ATOM records):

>d2rj4a1 c.68.1.9 (A:64-352) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevraykrwqd
vsmrrmemisfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssreaf
tyerrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwhdes
hlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavpknhqavr

Timeline for d2rj4a1:

• d2rj4a1 first appeared in SCOPe 2.01, called d2rj4a_
  
• d2rj4a1 was called d2rj4a_ in SCOPe 2.05
  
• d2rj4a1 appears in SCOPe 2.07
  
• d2rj4a1 appears in the current release, SCOPe 2.08