SCOPe 2.08: Domain d2q6fb_: 2q6f B:

Lineage for d2q6fb_ (2q6f B:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
   barrel, closed; n=6, S=8; greek-key
   duplication: consists of two domains of the same fold

4. Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)

5. Family b.47.1.0: automated matches [191364] (1 protein)
   not a true family

6. Protein automated matches [190438] (36 species)
   not a true protein

7. Species Infectious bronchitis virus [TaxId:11120] [188342] (2 PDB entries)

8. Domain d2q6fb_: 2q6f B: [167454]
   automated match to d1lvod_

Details for d2q6fb_

PDB Entry: 2q6f, 2 Å

PDB Description: crystal structure of infectious bronchitis virus (ibv) main protease in complex with a michael acceptor inhibitor n3

PDB Compounds: (B:) Infectious bronchitis virus (IBV) main protease

SCOPe Domain Sequences for d2q6fb_:

Sequence, based on SEQRES records:

>d2q6fb_ b.47.1.0 (B:) automated matches {Infectious bronchitis virus [TaxId: 11120]}
sgfkklvspssavekcivsvsyrgnnlnglwlgdsiycprhvlgkfsgdqwgdvlnlann
hefevvtqngvtlnvvsrrlkgavlilqtavanaetpkykfvkancgdsftiacsyggtv
iglypvtmrsngtirasflagacgsvgfniekgvvnffymhhlelpnalhtgtdlmgefy
ggyvdeevaqrvppdnlvtnnivawlyaaiisvkessfsqpkwlesttvsiedynrwasd
ngftpfststaitklsaitgvdvckllrtimvksaqwgsdpilgqynfedeltpesvfnq
vg

Sequence, based on observed residues (ATOM records):

>d2q6fb_ b.47.1.0 (B:) automated matches {Infectious bronchitis virus [TaxId: 11120]}
sgfkklvspssavekcivsvsyrgnnlnglwlgdsiycprhvlgkfsgdqwgdvlnlann
hefevvtqngvtlnvvsrrlkgavlilqtavanaetpkykfvkancgdsftiacsyggtv
iglypvtmrsngtirasflagacgsvgfniekgvvnffymhhlelpnalhtgtdlmgefy
ggyvdeevaqrvppdnlvtnnivawlyaaiisvpkwlesttvsiedynrwasdngftpfs
tstaitklsaitgvdvckllrtimvksaqwgsdpilgqynfedeltpesvfnqvg

Timeline for d2q6fb_:

• d2q6fb_ first appeared in SCOPe 2.01
  
• d2q6fb_ appears in SCOPe 2.07