Lineage for d2o9ib_ (2o9i B:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2008476Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 2008477Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 2008478Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 protein domains)
  6. 2009172Protein Pregnane x receptor, PXR [63624] (1 species)
  7. 2009173Species Human (Homo sapiens) [TaxId:9606] [63625] (16 PDB entries)
  8. 2009183Domain d2o9ib_: 2o9i B: [166591]
    automated match to d1m13a_
    complexed with 444

Details for d2o9ib_

PDB Entry: 2o9i (more details), 2.8 Å

PDB Description: Crystal Structure of the Human Pregnane X Receptor LBD in complex with an SRC-1 coactivator peptide and T0901317
PDB Compounds: (B:) orphan nuclear receptor pxr

SCOPe Domain Sequences for d2o9ib_:

Sequence, based on SEQRES records: (download)

>d2o9ib_ a.123.1.1 (B:) Pregnane x receptor, PXR {Human (Homo sapiens) [TaxId: 9606]}
glteeqrmmirelmdaqmktfdttfshfknfrlpgvlssgcelpeslqapsreeaakwsq
vrkdlcslkvslqlrgedgsvwnykppadsggkeifsllphmadmstymfkgiisfakvi
syfrdlpiedqisllkgaafelsqlrfntvfnaetgtwecgrlsycledtaggfqqllle
pmlkfhymlkklqlheeeyvlmqaislfspdrpgvlqhrvvdqlqeqfaitlksyiecnr
pqpahrflflkimamltelrsinaqhtqrllriqdihpfatplmqelfgitg

Sequence, based on observed residues (ATOM records): (download)

>d2o9ib_ a.123.1.1 (B:) Pregnane x receptor, PXR {Human (Homo sapiens) [TaxId: 9606]}
glteeqrmmirelmdaqmktfdttfshfknfrlpgvlsreeaakwsqvrkdlcslkvslq
lrgedgsvwnykppadsggkeifsllphmadmstymfkgiisfakvisyfrdlpiedqis
llkgaafelsqlrfntvfnaetgtwecgrlsycledtaggfqqlllepmlkfhymlkklq
lheeeyvlmqaislfspdrpgvlqhrvvdqlqeqfaitlksyiecnrpqpahrflflkim
amltelrsinaqhtqrllriqdihpfatplmqelfgitg

SCOPe Domain Coordinates for d2o9ib_:

Click to download the PDB-style file with coordinates for d2o9ib_.
(The format of our PDB-style files is described here.)

Timeline for d2o9ib_: