SCOPe 2.06: Domain d2o0rb1: 2o0r B:2-392

Lineage for d2o0rb1 (2o0r B:2-392)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.0: automated matches [191328] (1 protein)
   not a true family

6. Protein automated matches [190151] (121 species)
   not a true protein

7. Species Mycobacterium tuberculosis [TaxId:83332] [187938] (7 PDB entries)

8. Domain d2o0rb1: 2o0r B:2-392 [166483]
   Other proteins in same PDB: d2o0ra2, d2o0rb2
   automated match to d1u08a_
   complexed with cl, gol, na

Details for d2o0rb1

PDB Entry: 2o0r, 2 Å

PDB Description: the three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis

PDB Compounds: (B:) Rv0858c (N-Succinyldiaminopimelate aminotransferase)

SCOPe Domain Sequences for d2o0rb1:

Sequence, based on SEQRES records:

>d2o0rb1 c.67.1.0 (B:2-392) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}
tvsrlrpyattvfaemsalatrigavnlgqgfpdedgppkmlqaaqdaiaggvnqyppgp
gsaplrraiaaqrrrhfgvdydpetevlvtvgateaiaaavlglvepgsevlliepfyds
yspvvamagahrvtvplvpdgrgfaldadalrravtprtraliinsphnptgavlsatel
aaiaeiavaanlvvitdevyehlvfdharhlplagfdgmaertitissaakmfnctgwki
gwacgpaeliagvraakqylsyvggapfqpavalaldtedawvaalrnslrarrdrlaag
lteigfavhdsygtyflcadprplgyddstefcaalpekvgvaaipmsafcdpaagqasq
qadvwnhlvrftfckrddtldeairrlsvla

Sequence, based on observed residues (ATOM records):

>d2o0rb1 c.67.1.0 (B:2-392) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}
tvsrlrpyattvfaemsalatrigavnlgqgfpdedgppkmlqaaqdaiaggvnqyppgp
gsaplrraiaaqrrrhfgvdydpetevlvtvgateaiaaavlglvepgsevlliepfyds
yspvvamagahrvtvplvpdgrgfaldadalrravtprtraliinsphnptgavlsatel
aaiaeiavaanlvvitdevyehlvfdharhlplagfdgmaertitissaakmfnctgwki
gwacgpaeliagvraakqylsyvggapfqpavalaldtedawvaalrnslrarrdrlaag
lteigfavhdsygtyflcadprplgyddstefcaalpekvgvaaipmsafcdpadvwnhl
vrftfckrddtldeairrlsvla

Timeline for d2o0rb1:

• d2o0rb1 first appeared in SCOPe 2.01, called d2o0rb_
  
• d2o0rb1 was called d2o0rb_ in SCOPe 2.05
  
• d2o0rb1 appears in SCOPe 2.07
  
• d2o0rb1 appears in the current release, SCOPe 2.08