Lineage for d2nxdb_ (2nxd B:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2391025Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2391026Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2391027Family b.50.1.1: Retroviral protease (retropepsin) [50631] (9 proteins)
    dimer of identical mono-domain chains, each containing (6,10) barrel
  6. 2391043Protein Human immunodeficiency virus type 1 protease [50632] (9 species)
  7. 2391044Species Hiv-1 m:b_arv2/sf2 [TaxId:11685] [187932] (17 PDB entries)
  8. 2391080Domain d2nxdb_: 2nxd B: [166412]
    automated match to d1f7aa_

Details for d2nxdb_

PDB Entry: 2nxd (more details), 2 Å

PDB Description: structure of hiv-1 protease d25n complexed with rt-rh analogue peptide gly-ala-asp-ile-phe*tyr-leu-asp-gly-ala
PDB Compounds: (B:) protease retropepsin

SCOPe Domain Sequences for d2nxdb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2nxdb_ b.50.1.1 (B:) Human immunodeficiency virus type 1 protease {Hiv-1 m:b_arv2/sf2 [TaxId: 11685]}

SCOPe Domain Coordinates for d2nxdb_:

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(The format of our PDB-style files is described here.)

Timeline for d2nxdb_:

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