Lineage for d2i9ka_ (2i9k A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2129295Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. 2129296Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (60 families) (S)
  5. 2129999Family c.66.1.26: C5 cytosine-specific DNA methylase, DCM [88786] (5 protein domains)
    automatically mapped to Pfam PF00145
  6. 2130004Protein DNA methylase HhaI [53367] (2 species)
  7. 2130005Species Haemophilus haemolyticus [TaxId:726] [53368] (16 PDB entries)
    Uniprot P05102
  8. 2130020Domain d2i9ka_: 2i9k A: [165451]
    automated match to d10mha_
    protein/DNA complex; complexed with sah

Details for d2i9ka_

PDB Entry: 2i9k (more details), 2.65 Å

PDB Description: Engineered Extrahelical Base Destabilization Enhances Sequence Discrimination of DNA Methyltransferase M.HhaI
PDB Compounds: (A:) modification methylase hhai

SCOPe Domain Sequences for d2i9ka_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2i9ka_ c.66.1.26 (A:) DNA methylase HhaI {Haemophilus haemolyticus [TaxId: 726]}
mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegd
itqvnektipdhdilcagfpcqafsisgkqkgfedsrgtlffdiarivrekkpkvvfmen
vknaashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnf
qfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggqger
iystrgiaitlsaygggifaktggylvngktrklhprecarvmgypdsykvhpstsqayk
qfgnsvvinvlqyiaynigsslnfkpy

SCOPe Domain Coordinates for d2i9ka_:

Click to download the PDB-style file with coordinates for d2i9ka_.
(The format of our PDB-style files is described here.)

Timeline for d2i9ka_: