SCOPe 2.05: Domain d2hrdf_: 2hrd F:

Lineage for d2hrdf_ (2hrd F:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
   core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

4. Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families)
   complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8

5. Family c.56.2.1: Purine and uridine phosphorylases [53168] (7 proteins)

6. Protein Uridine phosphorylase [53176] (5 species)

7. Species Salmonella typhimurium [TaxId:90371] [117656] (24 PDB entries)
   Uniprot P0A1F6

8. Domain d2hrdf_: 2hrd F: [165219]
   automated match to d1ryza_
   complexed with 1pe, gol, po4, tdr

Details for d2hrdf_

PDB Entry: 2hrd, 1.7 Å

PDB Description: Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with thymine and phosphate ion at 1.70A resolution

PDB Compounds: (F:) Uridine phosphorylase

SCOPe Domain Sequences for d2hrdf_:

Sequence, based on SEQRES records:

>d2hrdf_ c.56.2.1 (F:) Uridine phosphorylase {Salmonella typhimurium [TaxId: 90371]}
sksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgka
vivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgasl
hfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfk
gsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesha
vkivveaarrll

Sequence, based on observed residues (ATOM records):

>d2hrdf_ c.56.2.1 (F:) Uridine phosphorylase {Salmonella typhimurium [TaxId: 90371]}
sksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgka
vivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgasl
hfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfk
gsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipneshavkivvea
arrll

Timeline for d2hrdf_:

• d2hrdf_ first appeared in SCOPe 2.01
  
• d2hrdf_ appears in SCOPe 2.04
  
• d2hrdf_ appears in SCOPe 2.06
  
• d2hrdf_ appears in the current release, SCOPe 2.08