SCOPe 2.03: Domain d2gija_: 2gij A:

Lineage for d2gija_ (2gij A:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (34 families)

5. Family c.52.1.19: Restriction endonuclease HincII [69525] (1 protein)
   automatically mapped to Pfam PF09226

6. Protein Restriction endonuclease HincII [69526] (1 species)

7. Species Haemophilus influenzae [TaxId:727] [69527] (18 PDB entries)
   Uniprot P17743 ! Uniprot P44413

8. Domain d2gija_: 2gij A: [164718]
   automated match to d1kc6a_
   protein/DNA complex; complexed with ca, na

Details for d2gija_

PDB Entry: 2gij, 1.93 Å

PDB Description: q138f hincii bound to cognate dna gttaac and ca2+

PDB Compounds: (A:) Type II restriction enzyme HincII

SCOPe Domain Sequences for d2gija_:

Sequence, based on SEQRES records:

>d2gija_ c.52.1.19 (A:) Restriction endonuclease HincII {Haemophilus influenzae [TaxId: 727]}
sfikpiyqdinsiligqkvkrpksgtlsghaagepfeklvykflkenlsdltfkqyeyln
dlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekqndtadillvkdq
fyelldvktrnisksafapniisayklaqtcakmidnkefdlfdinylevdwelngedlv
cvstsfaelfksepselyinwaaamqiqfhvrdldqgfngtreewaksylkhfvtqaeqr
aismidkfvkpfkkyil

Sequence, based on observed residues (ATOM records):

>d2gija_ c.52.1.19 (A:) Restriction endonuclease HincII {Haemophilus influenzae [TaxId: 727]}
sfikpiyqdinsiligqkvkrepfeklvykflkenlsdltfkqyeylndlfmknpaiigh
earyklfnsptllfllsrgkaatenwsienlfeekqndtadillvkdqfyelldvktrni
sksafapniisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfks
epselyinwaaamqiqfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpf
kkyil

Timeline for d2gija_:

• d2gija_ first appeared in SCOPe 2.01
  
• d2gija_ appears in SCOPe 2.02
  
• d2gija_ appears in SCOPe 2.04
  
• d2gija_ appears in the current release, SCOPe 2.08