SCOPe 2.08: Domain d2giib_: 2gii B:

Lineage for d2giib_ (2gii B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (37 families)

5. Family c.52.1.19: Restriction endonuclease HincII [69525] (1 protein)
   automatically mapped to Pfam PF09226

6. Protein Restriction endonuclease HincII [69526] (1 species)

7. Species Haemophilus influenzae [TaxId:727] [69527] (19 PDB entries)
   Uniprot P17743 ! Uniprot P44413

8. Domain d2giib_: 2gii B: [164717]
   automated match to d1kc6a_
   protein/DNA complex

Details for d2giib_

PDB Entry: 2gii, 2.3 Å

PDB Description: q138f hincii bound to cognate dna gttaac

PDB Compounds: (B:) Type II restriction enzyme HincII

SCOPe Domain Sequences for d2giib_:

Sequence, based on SEQRES records:

>d2giib_ c.52.1.19 (B:) Restriction endonuclease HincII {Haemophilus influenzae [TaxId: 727]}
sfikpiyqdinsiligqkvkrpksgtlsghaagepfeklvykflkenlsdltfkqyeyln
dlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekqndtadillvkdq
fyelldvktrnisksafapniisayklaqtcakmidnkefdlfdinylevdwelngedlv
cvstsfaelfksepselyinwaaamqiqfhvrdldqgfngtreewaksylkhfvtqaeqr
aismidkfvkpfkky

Sequence, based on observed residues (ATOM records):

>d2giib_ c.52.1.19 (B:) Restriction endonuclease HincII {Haemophilus influenzae [TaxId: 727]}
sfikpiyqdinsiliepfeklvykflkenlsdltfkqyeylndlfmknpaiighearykl
fnsptllfllsrgkaatenwslfeekqndtadillvkdqfyelldvktrnisksafapni
isayklaqtcakmidnkefdlfdinylevdwecvstsfaelfksepselyinwaaamqiq
fhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkky

Timeline for d2giib_:

• d2giib_ first appeared in SCOPe 2.01
  
• d2giib_ appears in SCOPe 2.07