Lineage for d2fddb_ (2fdd B:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2058814Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2058815Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2058816Family b.50.1.1: Retroviral protease (retropepsin) [50631] (9 protein domains)
    dimer of identical mono-domain chains, each containing (6,10) barrel
  6. 2060049Protein automated matches [190433] (11 species)
    not a true protein
  7. 2060093Species Human immunodeficiency virus 1 [TaxId:11676] [187327] (22 PDB entries)
  8. 2060106Domain d2fddb_: 2fdd B: [164335]
    automated match to d1rpia_
    complexed with 385

Details for d2fddb_

PDB Entry: 2fdd (more details), 1.58 Å

PDB Description: Crystal structure of HIV protease D545701 bound with GW0385
PDB Compounds: (B:) Gag-Pol polyprotein

SCOPe Domain Sequences for d2fddb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2fddb_ b.50.1.1 (B:) automated matches {Human immunodeficiency virus 1 [TaxId: 11676]}

SCOPe Domain Coordinates for d2fddb_:

Click to download the PDB-style file with coordinates for d2fddb_.
(The format of our PDB-style files is described here.)

Timeline for d2fddb_: