SCOPe 2.08: Domain d2ek3b_: 2ek3 B:

Lineage for d2ek3b_ (2ek3 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.90: Tetrapyrrole methylase [53789] (1 superfamily)
   consists of two non-similar domains
   Domain 1 has parallel sheet of 5 strands, order 32415
   Domain 2 has mixed sheet of 5 strands, order 12534; strands 4 & 5 are antiparallel to the rest

4. Superfamily c.90.1: Tetrapyrrole methylase [53790] (2 families)

5. Family c.90.1.1: Tetrapyrrole methylase [53791] (8 proteins)
   Pfam PF00590

6. Protein Diphthine synthase, DphB [102684] (3 species)
   diphthamide biosynthesis methyltransferase

7. Species Pyrococcus horikoshii [TaxId:53953] [142779] (80 PDB entries)
   Uniprot O58456 1-265

8. Domain d2ek3b_: 2ek3 B: [164118]
   automated match to d1vcea1
   complexed with na, sah

Details for d2ek3b_

PDB Entry: 2ek3, 2.8 Å

PDB Description: structural study of project id ph0725 from pyrococcus horikoshii ot3 (l3m)

PDB Compounds: (B:) diphthine synthase

SCOPe Domain Sequences for d2ek3b_:

Sequence; same for both SEQRES and ATOM records:

>d2ek3b_ c.90.1.1 (B:) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]}
vmyfiglglyderditvkgleiakkcdyvfaefytslmagttlgriqkligkeirvlsre
dvelnfenivlplakendvafltpgdplvatthaelrirakragvesyvihapsiysavg
itglhiykfgksatvaypegnwfptsyydvikenaerglhtllfldikaekrmymtanea
melllkvedmkkggvftddtlvvvlaragslnptiragyvkdliredfgdpphilivpgk
lhiveaeylveiagapreilrvnv

Timeline for d2ek3b_:

• d2ek3b_ first appeared in SCOPe 2.01
  
• d2ek3b_ appears in SCOPe 2.07