SCOPe 2.01: Domain d2e5wb_: 2e5w B:

Lineage for d2e5wb_ (2e5w B:)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (58 families)

5. Family c.66.1.17: Spermidine synthase [69557] (3 proteins)
   contains additional N-terminal tetramerisation all-beta domain, res. 1-71

6. Protein automated matches [190432] (5 species)
   not a true protein

7. Species Pyrococcus horikoshii [TaxId:70601] [187326] (1 PDB entry)

8. Domain d2e5wb_: 2e5w B: [163837]
   automated match to d1mjfa_
   complexed with act, ag3, mta

Details for d2e5wb_

PDB Entry: 2e5w, 2 Å

PDB Description: Crystal structure of spermidine synthase from Pyrococcus horikoshii OT3

PDB Compounds: (B:) Probable spermidine synthase

SCOPe Domain Sequences for d2e5wb_:

Sequence, based on SEQRES records:

>d2e5wb_ c.66.1.17 (B:) automated matches {Pyrococcus horikoshii [TaxId: 70601]}
mefiewyprgygvafkvkrkileeqseyqkievyetegfgkllaidgtvqlvtegeksyh
eplvhpamlahpnprrvliigggdggairevlkheeveevimveidkkvieisakyigid
ggilekmlsdkhekgkliigdgvkfieensgfdviivdstdpvgpaemlfseefyknayr
alndpgiyvtqagsvylftdefltayrkmrkvfdkvyyysfpvigyaspwaflvgvkgsi
dfmkvdaekgkklgleyydpdkhetlfqmpryivqml

Sequence, based on observed residues (ATOM records):

>d2e5wb_ c.66.1.17 (B:) automated matches {Pyrococcus horikoshii [TaxId: 70601]}
mefiewyprgygvafkvkrkileeqseyqkievyetegfgkllaidgtvqlvtegeksyh
eplvhpamlahpnprrvliigggdggairevlkheeveevimveidkkvieisakyigid
ggilekmlsdkhekgkliigdgvkfieensgfdviivdsmlfseefyknayralndpgiy
vtqagsvylftdefltayrkmrkvfdkvyyysfpvigyaspwaflvgvkgsidfmkvdae
kgkklgleyydpdkhetlfqmpryivqml

Timeline for d2e5wb_:

• d2e5wb_ is new in SCOPe 2.01-stable
  
• d2e5wb_ appears in SCOPe 2.02
  
• d2e5wb_ appears in the current release, SCOPe 2.08