Lineage for d2cybb_ (2cyb B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2105373Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
    core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
  4. 2105374Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families) (S)
  5. 2105375Family c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain [52375] (13 protein domains)
    contains a conserved all-alpha subdomain at the C-terminal extension
  6. 2105607Protein automated matches [190581] (9 species)
    not a true protein
  7. 2105608Species Archaeoglobus fulgidus [TaxId:2234] [187585] (1 PDB entry)
  8. 2105610Domain d2cybb_: 2cyb B: [163511]
    automated match to d1j1ua_
    protein/RNA complex; complexed with tyr

Details for d2cybb_

PDB Entry: 2cyb (more details), 1.8 Å

PDB Description: Crystal structure of Tyrosyl-tRNA Synthetase complexed with L-tyrosine from Archaeoglobus fulgidus
PDB Compounds: (B:) Tyrosyl-tRNA synthetase

SCOPe Domain Sequences for d2cybb_:

Sequence, based on SEQRES records: (download)

>d2cybb_ c.26.1.1 (B:) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}
mditeklrlitrnaeevvteeelrqlietkekprayvgyepsgeihlghmmtvqklmdlq
eagfeiivlladihaylnekgtfeeiaevadynkkvfialgldesrakfvlgseyqlsrd
yvldvlkmarittlnrarrsmdevsrrkedpmvsqmiyplmqaldiahlgvdlavggidq
rkihmlarenlprlgysspvclhtpilvgldgqkmssskgnyisvrdppeeverkirkay
cpagvveenpildiakyhilprfgkivverdakfggdveyasfeelaedfksgqlhpldl
kiavakylnmlledarkrlg

Sequence, based on observed residues (ATOM records): (download)

>d2cybb_ c.26.1.1 (B:) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}
mditeklrlitrnaeevvteeelrqlietkekprayvgyepsgeihlghmmtvqklmdlq
eagfeiivlladihaylnekgtfeeiaevadynkkvfialgldesrakfvlgseyqlsrd
yvldvlkmarittlnrarrsmdevsrrkedpmvsqmiyplmqaldiahlgvdlavggidq
rkihmlarenlprlgysspvclhtpilvgldgqkmssskgnyisvrdppeeverkirkay
cpagvveenpildiakyhilprfgkivverdagdveyasfeelaedfksgqlhpldlkia
vakylnmlledarkrlg

SCOPe Domain Coordinates for d2cybb_:

Click to download the PDB-style file with coordinates for d2cybb_.
(The format of our PDB-style files is described here.)

Timeline for d2cybb_: