SCOPe 2.07: Domain d2ajpa1: 2ajp A:6-312

Lineage for d2ajpa1 (2ajp A:6-312)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.5: PfkB-like kinase [82515] (3 proteins)
   includes a variety of carbohydrate and pyrimidine kinases

6. Protein automated matches [190479] (4 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187406] (10 PDB entries)

8. Domain d2ajpa1: 2ajp A:6-312 [162822]
   Other proteins in same PDB: d2ajpa2, d2ajpb2
   automated match to d1lhpa_
   complexed with anp, mg, unx

Details for d2ajpa1

PDB Entry: 2ajp, 2.5 Å

PDB Description: crystal structure of a human pyridoxal kinase

PDB Compounds: (A:) Pyridoxal kinase

SCOPe Domain Sequences for d2ajpa1:

Sequence, based on SEQRES records:

>d2ajpa1 c.72.1.5 (A:6-312) automated matches {Human (Homo sapiens) [TaxId: 9606]}
rvlsiqshvirgyvgnraatfplqvlgfeidavnsvqfsnhtgyahwkgqvlnsdelqel
yeglrlnnmnkydyvltgytrdksflamvvdivqelkqqnprlvyvcdpvlgdkwdgegs
myvpedllpvykekvvpladiitpnqfeaellsgrkihsqeealrvmdmlhsmgpdtvvi
tssdlpspqgsnylivlgsqrrrnpagsvvmerirmdirkvdavfvgtgdlfaamllawt
hkhpnnlkvacektvstlhhvlqrtiqcakaqagegvrpspmqlelrmvqskrdiedpei
vvqatvl

Sequence, based on observed residues (ATOM records):

>d2ajpa1 c.72.1.5 (A:6-312) automated matches {Human (Homo sapiens) [TaxId: 9606]}
rvlsiqshvirgyvgnraatfplqvlgfeidavnsvqfsnhtgyahwkgqvlnsdelqel
yeglrlnnmnkydyvltgytrdksflamvvdivqelkqqnprlvyvcdpvlgdkwdgegs
myvpedllpvykekvvpladiitpnqfeaellsgrkihsqeealrvmdmlhsmgpdtvvi
tssdlpspqgsnylivlgsqrrrvvmerirmdirkvdavfvgtgdlfaamllawthkhpn
nlkvacektvstlhhvlqrtiqcakaqagegvrpspmqlelrmvqskrdiedpeivvqat
vl

Timeline for d2ajpa1:

• d2ajpa1 first appeared in SCOPe 2.01, called d2ajpa_
  
• d2ajpa1 appears in SCOPe 2.06
  
• d2ajpa1 appears in the current release, SCOPe 2.08