SCOPe 2.08: Domain d2ag6a1: 2ag6 A:1-306

Lineage for d2ag6a1 (2ag6 A:1-306)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families)

5. Family c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain [52375] (13 proteins)
   contains a conserved all-alpha subdomain at the C-terminal extension

6. Protein Tyrosyl-tRNA synthetase (TyrRS) [52376] (6 species)

7. Species Methanococcus jannaschii [TaxId:2190] [89611] (9 PDB entries)

8. Domain d2ag6a1: 2ag6 A:1-306 [162777]
   Other proteins in same PDB: d2ag6a2
   automated match to d1j1ua_
   protein/RNA complex; complexed with 4bf

Details for d2ag6a1

PDB Entry: 2ag6, 1.9 Å

PDB Description: crystal structure of p-bromo-l-phenylalanine-trna sythetase in complex with p-bromo-l-phenylalanine

PDB Compounds: (A:) Tyrosyl-tRNA synthetase

SCOPe Domain Sequences for d2ag6a1:

Sequence; same for both SEQRES and ATOM records:

>d2ag6a1 c.26.1.1 (A:1-306) Tyrosyl-tRNA synthetase (TyrRS) {Methanococcus jannaschii [TaxId: 2190]}
mdefemikrntseiiseeelrevlkkdeksaligfepsgkihlghylqikkmidlqnagf
diiilladlhaylnqkgeldeirkigdynkkvfeamglkakyvygssfqldkdytlnvyr
lalkttlkrarrsmeliaredenpkvaeviypimqvnplhyegvdvavggmeqrkihmla
rellpkkvvcihnpvltgldgegkmssskgnfiavddspeeirakikkaycpagvvegnp
imeiakyfleypltikrpekfggdltvnsyeeleslfknkelhpmdlknavaeelikile
pirkrl

Timeline for d2ag6a1:

• d2ag6a1 first appeared in SCOPe 2.01, called d2ag6a_
  
• d2ag6a1 appears in SCOPe 2.07