SCOPe 2.05: Domain d1yjfa_: 1yjf A:

Lineage for d1yjfa_ (1yjf A:)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.22: GFP-like [54510] (1 superfamily)
   beta-sheet folds into a barrel (n=11, S=14) around the central helix

4. Superfamily d.22.1: GFP-like [54511] (3 families)

5. Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)

6. Protein automated matches [190406] (16 species)
   not a true protein

7. Species Jellyfish (Aequorea victoria) [TaxId:6100] [188134] (40 PDB entries)

8. Domain d1yjfa_: 1yjf A: [162214]
   automated match to d1qyoa_
   complexed with mg

Details for d1yjfa_

PDB Entry: 1yjf, 1.35 Å

PDB Description: cyclized post-translational product for s65a y66s (gfphal) green fluorescent protein variant

PDB Compounds: (A:) Green fluorescent protein

SCOPe Domain Sequences for d1yjfa_:

Sequence; same for both SEQRES and ATOM records:

>d1yjfa_ d.22.1.1 (A:) automated matches {Jellyfish (Aequorea victoria) [TaxId: 6100]}
geelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvtt
fasgvqcfsrypdhmkqhdffksampegyvqertisfkddgnyktraevkfegdtlvnri
elkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqladhyq
qntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagith

Timeline for d1yjfa_:

• d1yjfa_ first appeared in SCOPe 2.01
  
• d1yjfa_ appears in SCOPe 2.04
  
• d1yjfa_ appears in SCOPe 2.06
  
• d1yjfa_ appears in the current release, SCOPe 2.08