Lineage for d1ycla_ (1ycl A:)

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1943314Fold d.185: LuxS/MPP-like metallohydrolase [63410] (1 superfamily)
    core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta
  4. 1943315Superfamily d.185.1: LuxS/MPP-like metallohydrolase [63411] (3 families) (S)
    Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues
  5. 1943555Family d.185.1.2: Autoinducer-2 production protein LuxS [64294] (1 protein)
    contains additional N-terminal strand; possible relationships to the putative editing domain of ThrRS (d.67.1)
    automatically mapped to Pfam PF02664
  6. 1943556Protein Autoinducer-2 production protein LuxS [64295] (5 species)
    S-ribosylhomocysteinase
  7. 1943557Species Bacillus subtilis [TaxId:1423] [64296] (7 PDB entries)
  8. 1943562Domain d1ycla_: 1ycl A: [162180]
    automated match to d1ie0a_
    complexed with co, kri, so4

Details for d1ycla_

PDB Entry: 1ycl (more details), 1.8 Å

PDB Description: crystal structure of b. subtilis luxs in complex with a catalytic 2- ketone intermediate
PDB Compounds: (A:) S-ribosylhomocysteinase

SCOPe Domain Sequences for d1ycla_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ycla_ d.185.1.2 (A:) Autoinducer-2 production protein LuxS {Bacillus subtilis [TaxId: 1423]}
vesfeldhnavvapyvrhcgvhkvgtdgvvnkfdirfcqpnkqamkpdtihtlehllaft
irshaekydhfdiidispmgaqtgyylvvsgeptsaeivdlledtmkeaveiteipaane
kqcgqaklhdlegakrlmrfwlsqdkeellkvfg

SCOPe Domain Coordinates for d1ycla_:

Click to download the PDB-style file with coordinates for d1ycla_.
(The format of our PDB-style files is described here.)

Timeline for d1ycla_: