Lineage for d1w5mb_ (1w5m B:)

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 968086Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 972170Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 972812Family c.1.10.3: 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) [51594] (2 proteins)
    hybrid of classes I and II aldolase
  6. 972849Protein automated matches [190088] (3 species)
    not a true protein
  7. 972852Species Pseudomonas aeruginosa [TaxId:208964] [188066] (6 PDB entries)
  8. 972856Domain d1w5mb_: 1w5m B: [161896]
    automated match to d1gzgb_
    complexed with cl, fmt, mg, zn; mutant

Details for d1w5mb_

PDB Entry: 1w5m (more details), 1.6 Å

PDB Description: stepwise introduction of zinc binding site into porphobilinogen synthase of pseudomonas aeruginosa (mutations a129c and d139c)
PDB Compounds: (B:) delta-aminolevulinic acid dehydratase

SCOPe Domain Sequences for d1w5mb_:

Sequence, based on SEQRES records: (download)

>d1w5mb_ c.1.10.3 (B:) automated matches {Pseudomonas aeruginosa [TaxId: 208964]}
anraypytrlrrnrrddfsrrlvrenvltvddlilpvfvldgvnqresipsmpgverlsi
dqllieaeewvalgipalalfpvtpvekksldaaeaynpegiaqratralrerfpelgii
tdvcldpftthgqcgildddgyvlndvsidvlvrqalshaeagaqvvapsdmmdgrigai
realesaghtnvrvmaysakyasayygpfrdavgsasnlgkgnkatyqmdpansdealhe
vaadlaegadmvmvkpgmpyldivrrvkdefraptfvyqvsgeyamhmgaiqngwlaesv
ilesltafkragadgiltyfakqaaeqlrrg

Sequence, based on observed residues (ATOM records): (download)

>d1w5mb_ c.1.10.3 (B:) automated matches {Pseudomonas aeruginosa [TaxId: 208964]}
anraypytrlrrnrrddfsrrlvrenvltvddlilpvfvldgvnqresipsmpgverlsi
dqllieaeewvalgipalalfpvtpvekksldaaeaynpegiaqratralrerfpelgii
tdvcldpftthgqcgildddgyvlndvsidvlvrqalshaeagaqvvapsdmmdgrigai
realesaghtnvrvmaysakyasayygpfrdavgsnkatyqmdpansdealhevaadlae
gadmvmvkpgmpyldivrrvkdefraptfvyqvsgeyamhmgaiqngwlaesvileslta
fkragadgiltyfakqaaeqlrrg

SCOPe Domain Coordinates for d1w5mb_:

Click to download the PDB-style file with coordinates for d1w5mb_.
(The format of our PDB-style files is described here.)

Timeline for d1w5mb_: