SCOPe 2.05: Domain d2nygf_: 2nyg F:

Lineage for d2nygf_ (2nyg F:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.140: TTHA0583/YokD-like [110709] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 8 strands, order 78612354; strands 3, 4 and 8 are antiparallel to the rest

4. Superfamily c.140.1: TTHA0583/YokD-like [110710] (3 families)

5. Family c.140.1.2: Aminoglycoside 3-N-acetyltransferase-like [159765] (1 protein)
   Pfam PF02522; CoA-dependent enzymes

6. Protein Uncharacterized protein YokD [159766] (1 species)

7. Species Bacillus subtilis [TaxId:1423] [159767] (1 PDB entry)
   Uniprot O32003 2-271

8. Domain d2nygf_: 2nyg F: [161482]
   automated match to d2nyga1
   complexed with coa

Details for d2nygf_

PDB Entry: 2nyg, 2.6 Å

PDB Description: crystal structure of yokd protein from bacillus subtilis

PDB Compounds: (F:) YokD protein

SCOPe Domain Sequences for d2nygf_:

Sequence, based on SEQRES records:

>d2nygf_ c.140.1.2 (F:) Uncharacterized protein YokD {Bacillus subtilis [TaxId: 1423]}
rtkqsitedlkalglkkgmtvlvhsslssigwvnggavaviqalidvvteegtivmpsqs
velsdpkewgnppvpeewwdiiresmpaynsnytpttrgmgqivelfrsypevkrsnhpn
ysfvawgkhknkilnqhplefglgeqsplgklyiresyvlllgadfdsstcfhlaeyrip
yqkiinrgapiivegkrvwkeykelefreelfqevgqafeaehnmkvgkvgsancrlfsl
teavdfaekwfinn

Sequence, based on observed residues (ATOM records):

>d2nygf_ c.140.1.2 (F:) Uncharacterized protein YokD {Bacillus subtilis [TaxId: 1423]}
rtkqsitedlkalglkkgmtvlvhsslssigwvnggavaviqalidvvteegtivmpsqs
velsdpkewpvpeewwdiiresmpaynsnytpttrgmgqivelfrsypevkrsnhpnysf
vawgkhknkilnqhplefglgeqsplgklyiresyvlllgadfdsstcfhlaeyripyqk
iinrgapiivegkrvwkeykelefreelfqevgqafeaekvgkvgsancrlfslteavdf
aekwfinn

Timeline for d2nygf_:

• d2nygf_ first appeared in SCOPe 2.01
  
• d2nygf_ appears in SCOPe 2.04
  
• d2nygf_ appears in SCOPe 2.06
  
• d2nygf_ appears in the current release, SCOPe 2.08