SCOPe 2.06: Domain d2f9cb1: 2f9c B:3-326

Lineage for d2f9cb1 (2f9c B:3-326)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.81: Single-stranded left-handed beta-helix [51160] (4 superfamilies)
   superhelix turns are made of parallel beta-strands and (short) turns

4. Superfamily b.81.1: Trimeric LpxA-like enzymes [51161] (9 families)
   superhelical turns are made of three short strands; duplication: the sequence hexapeptide repeats correspond to individual strands

5. Family b.81.1.7: YdcK-like [141583] (2 proteins)
   part of Pfam PF00132
   this is a repeat family; one repeat unit is 2f9c A:267-285 found in domain

6. Protein automated matches [190635] (2 species)
   not a true protein

7. Species Salmonella enterica [TaxId:28901] [187691] (1 PDB entry)

8. Domain d2f9cb1: 2f9c B:3-326 [161425]
   Other proteins in same PDB: d2f9ca1, d2f9cb2
   automated match to d2f9ca1
   complexed with cs

Details for d2f9cb1

PDB Entry: 2f9c, 2.8 Å

PDB Description: Crystal structure of YDCK from Salmonella cholerae. NESG target SCR6

PDB Compounds: (B:) Hypothetical protein YDCK

SCOPe Domain Sequences for d2f9cb1:

Sequence, based on SEQRES records:

>d2f9cb1 b.81.1.7 (B:3-326) automated matches {Salmonella enterica [TaxId: 28901]}
kyrlsegpraftyqvdgekksvllrqviavtdfndvkagtsggwvdadnvlsqqgdcwiy
denamafagteitgnaritqpctlynnvrigdnvwidradisdgarisdnvtiqsssvre
ecaiygdarvlnqseilaiqglthehaqilqiydratvnhsrivhqvqlygnatithafi
ehraevfdfaliegdkdnnvwicdcakvygharviagteedaiptlryssqvaehalieg
ncvlkhhvlvgghaevrggpillddrvlieghaciqgeilierqveisgraaviafddnt
ihlrgpkvingedritrtplvgsl

Sequence, based on observed residues (ATOM records):

>d2f9cb1 b.81.1.7 (B:3-326) automated matches {Salmonella enterica [TaxId: 28901]}
kyrlsegpraftyqvdgekksvllrqviavtdfndvkagtsggwvdadnvlsqqgdcwiy
denamafagteitgnaritqpctlynnvrigdnvwidradisdgarisdnvtiqsssvre
ecaiygdarvlnqseilaiilqiydratvnhsrivhqvqlygnatithafiehraevfdf
aliegdkdnnvwicdcakvygharviagteedaiptlryssqvaehaliegncvlkhhvl
vgghaevrggpillddrvlieghaciqgeilierqveisgraaviafddntihlrgpkvi
ngedritrtplvgsl

Timeline for d2f9cb1:

• d2f9cb1 first appeared in SCOPe 2.01, called d2f9cb_
  
• d2f9cb1 was called d2f9cb_ in SCOPe 2.05
  
• d2f9cb1 appears in SCOPe 2.07
  
• d2f9cb1 appears in the current release, SCOPe 2.08