SCOPe 2.05: Domain d1zccb_: 1zcc B:

Lineage for d1zccb_ (1zcc B:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.18: PLC-like phosphodiesterases [51695] (4 families)

5. Family c.1.18.3: Glycerophosphoryl diester phosphodiesterase [89508] (5 proteins)
   Pfam PF03009

6. Protein automated matches [190795] (2 species)
   not a true protein

7. Species Agrobacterium tumefaciens [TaxId:176299] [188183] (1 PDB entry)

8. Domain d1zccb_: 1zcc B: [161371]
   Other proteins in same PDB: d1zcca1
   automated match to d1zcca1
   complexed with act, so4

Details for d1zccb_

PDB Entry: 1zcc, 2.5 Å

PDB Description: crystal structure of glycerophosphodiester phosphodiesterase from agrobacterium tumefaciens str.c58

PDB Compounds: (B:) glycerophosphodiester phosphodiesterase

SCOPe Domain Sequences for d1zccb_:

Sequence, based on SEQRES records:

>d1zccb_ c.1.18.3 (B:) automated matches {Agrobacterium tumefaciens [TaxId: 176299]}
mtkivshrganrfapentfaaadlalqqgadyieldvresadgvlyvihdetldrttngt
gpvghmlsseidtldaggwfddrfkgaivprldaylehlrgragvyielkycdpakvaal
vrhlgmvrdtfyfsfseemrqglqsiapefrrmmtldiakspslvgavhhasiieitpaq
mrrpgiieasrkagleimvyyggddmavhreiatsdvdyinldrpdlfaa

Sequence, based on observed residues (ATOM records):

>d1zccb_ c.1.18.3 (B:) automated matches {Agrobacterium tumefaciens [TaxId: 176299]}
mtkivshrganrfapentfaaadlalqqgadyieldvresadgvlyvihdetldrttngt
gpvghmlsseidtldaggwfrfkgaivprldaylehlrgragvyielkycdpakvaalvr
hlgmvrdtfyfsfseemrqglqsiapefrrmmtldiakspslvgavhhasiieitpaqmr
rpgiieasrkagleimvyyggddmavhreiatsdvdyinldrpdlfaa

Timeline for d1zccb_:

• d1zccb_ first appeared in SCOPe 2.01
  
• d1zccb_ appears in SCOPe 2.04
  
• d1zccb_ appears in SCOPe 2.06
  
• d1zccb_ appears in the current release, SCOPe 2.08