Lineage for d1yw4b_ (1yw4 B:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2887810Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 2889494Superfamily c.56.5: Zn-dependent exopeptidases [53187] (10 families) (S)
    core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest
  5. 2889922Family c.56.5.7: AstE/AspA-like [142526] (3 proteins)
    Pfam PF04952; Succinylglutamate desuccinylase / Aspartoacylase family; contains extra C-terminal domain, new variant of the Barrel-sandwich hybrid fold (51229)
  6. 2889938Protein Succinylglutamate desuccinylase AstE [142527] (4 species)
  7. 2889939Species Chromobacterium violaceum [TaxId:536] [142531] (1 PDB entry)
    Uniprot Q7NU26 2-332
  8. 2889941Domain d1yw4b_: 1yw4 B: [161369]
    automated match to d1yw4a1
    complexed with zn

Details for d1yw4b_

PDB Entry: 1yw4 (more details), 2 Å

PDB Description: crystal structure of the succinylglutamate desuccinylase from chromobacterium violaceum, northeast structural genomics target cvr22.
PDB Compounds: (B:) Succinylglutamate desuccinylase

SCOPe Domain Sequences for d1yw4b_:

Sequence, based on SEQRES records: (download)

>d1yw4b_ c.56.5.7 (B:) Succinylglutamate desuccinylase AstE {Chromobacterium violaceum [TaxId: 536]}
spsflqhalsssdtraewplpgglaarwlapgcvelngdargadsvllscgvhgnetapi
evvdgmltdiaagqlalncrllvmfanldairqgvrygnydmnrlfngaharhpelpesv
raaeletlaaeffagararklhydlhtairgsvfekfaiypflhdgrthkreqlawlqrc
gieavllhtqpantfsyftsqyceadaftlelgkarpfgqndlsrfsgidgalrgllsnp
qanvpdldedklplfrakydlvkhseafklnladsvenftllpdgmliaedgavryqatg
geerilfpnpavkpglragivveparlp

Sequence, based on observed residues (ATOM records): (download)

>d1yw4b_ c.56.5.7 (B:) Succinylglutamate desuccinylase AstE {Chromobacterium violaceum [TaxId: 536]}
spsflqhalsssdtraewplpgglaarwlapgcvelngdargadsvllscgvhgnetapi
evvdgmltdiaagqlalncrllvmfanldairqgvrygnydmnrlfngaharhpelpesv
raaeletlaaeffagararklhydlhtairgsvfekfaiypflhdgrthkreqlawlqrc
gieavllhtqpantfsyftsqyceadaftlelgkarpfgqndlsrfsgidgalrgllsnp
qanvpdldedklplfrakydlvlnladsvenftllpdgmliaryqatggeerilfpnpag
ivveparlp

SCOPe Domain Coordinates for d1yw4b_:

Click to download the PDB-style file with coordinates for d1yw4b_.
(The format of our PDB-style files is described here.)

Timeline for d1yw4b_: