SCOPe 2.06: Protein: Bacteriophytochrome BphP

Lineage for Protein: Bacteriophytochrome BphP

Root: SCOPe 2.06
Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
Fold d.110: Profilin-like [55769] (10 superfamilies)
core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
Superfamily d.110.2: GAF domain-like [55781] (5 families)
alpha(2)-beta(3)-alpha-beta(3)-alpha; antiparallel beta-sheet: order 321654
Family d.110.2.1: GAF domain [55782] (8 proteins)
Protein Bacteriophytochrome BphP [160661] (3 species)

Species:

Deinococcus radiodurans [TaxId:1299] [160663] (7 PDB entries)
Uniprot Q9RZA4 135-321! Uniprot Q9RZA4 137-325
1. Domain for 1ztu:
  - Domain d1ztua1: 1ztu A:137-321 [146024]
    Other proteins in same PDB: d1ztua2, d1ztua3
    complexed with bla
2. Domain for 2o9b:
  - Domain d2o9ba1: 2o9b A:135-321 [148682]
    Other proteins in same PDB: d2o9ba2, d2o9ba3
    complexed with lbv
3. Domain for 2o9c:
  - Domain d2o9ca1: 2o9c A:135-321 [148684]
    Other proteins in same PDB: d2o9ca2, d2o9ca3
    automated match to d2o9ba1
    complexed with lbv
4. Domain for 3s7n:
  - Domain d3s7na2: 3s7n A:135-321 [216229]
    Other proteins in same PDB: d3s7na1, d3s7na3
    automated match to d1ztua1
    complexed with lbv
5. Domain for 3s7o:
  - Domain d3s7oa2: 3s7o A:135-321 [216231]
    Other proteins in same PDB: d3s7oa1, d3s7oa3
    automated match to d1ztua1
    complexed with gol, lbv
6. Domain for 3s7p:
  - Domain d3s7pa2: 3s7p A:135-321 [216233]
    Other proteins in same PDB: d3s7pa1, d3s7pa3
    automated match to d1ztua1
    complexed with lbv
7. Domain for 3s7q:
  - Domain d3s7qa2: 3s7q A:138-321 [216235]
    Other proteins in same PDB: d3s7qa1, d3s7qa3
    automated match to d1ztua1
    complexed with gol, lbv, lbw, po4
Deinococcus radiodurans [TaxId:243230] [258261] (2 PDB entries)
1. Domain for 4ijg:
  - Domain d4ijga2: 4ijg A:137-323 [230055]
    Other proteins in same PDB: d4ijga1
    automated match to d2o9ba1
    complexed with gol, lbv, peg, po4
2. Domain for 4q0h:
  - Domain d4q0ha2: 4q0h A:135-321 [258262]
    Other proteins in same PDB: d4q0ha1, d4q0ha3, d4q0ha4
    automated match to d2o9ba1
    complexed with cl, ipa, lbv

Pseudomonas aeruginosa [TaxId:287] [160662] (5 PDB entries)
Uniprot Q9HWR3 118-309

Domains for 3c2w:

Domain d3c2wa1: 3c2w A:118-309 [155887]
Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wf4, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
complexed with bla

Domain d3c2wb1: 3c2w B:118-309 [155890]
Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wf4, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
automated match to d3c2wa1
complexed with bla

Domain d3c2wc1: 3c2w C:118-309 [155893]
Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wf4, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
automated match to d3c2wa1
complexed with bla

Domain d3c2wd1: 3c2w D:118-309 [155896]
Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wf4, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
automated match to d3c2wa1
complexed with bla

Domain d3c2we1: 3c2w E:118-309 [155899]
Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wf4, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
automated match to d3c2wa1
complexed with bla

Domain d3c2wf1: 3c2w F:118-309 [155902]
Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wf4, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
automated match to d3c2wa1
complexed with bla

Domain d3c2wg1: 3c2w G:118-309 [155905]
Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wf4, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
automated match to d3c2wa1
complexed with bla

Domain d3c2wh1: 3c2w H:118-309 [155908]
Other proteins in same PDB: d3c2wa2, d3c2wa3, d3c2wb2, d3c2wb3, d3c2wc2, d3c2wc3, d3c2wd2, d3c2wd3, d3c2we2, d3c2we3, d3c2wf2, d3c2wf3, d3c2wf4, d3c2wg2, d3c2wg3, d3c2wh2, d3c2wh3
automated match to d3c2wa1
complexed with bla

Domains for 3nhq:

Domain d3nhqa2: 3nhq A:118-309 [213956]
Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqf4, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
automated match to d3c2wa1
complexed with bla

Domain d3nhqb2: 3nhq B:118-309 [213959]
Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqf4, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
automated match to d3c2wa1
complexed with bla

Domain d3nhqc2: 3nhq C:118-309 [213962]
Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqf4, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
automated match to d3c2wa1
complexed with bla

Domain d3nhqd2: 3nhq D:118-309 [213965]
Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqf4, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
automated match to d3c2wa1
complexed with bla

Domain d3nhqe2: 3nhq E:118-309 [213968]
Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqf4, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
automated match to d3c2wa1
complexed with bla

Domain d3nhqf2: 3nhq F:118-309 [213971]
Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqf4, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
automated match to d3c2wa1
complexed with bla

Domain d3nhqg2: 3nhq G:118-309 [213974]
Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqf4, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
automated match to d3c2wa1
complexed with bla

Domain d3nhqh2: 3nhq H:118-309 [213977]
Other proteins in same PDB: d3nhqa1, d3nhqa3, d3nhqb1, d3nhqb3, d3nhqc1, d3nhqc3, d3nhqd1, d3nhqd3, d3nhqe1, d3nhqe3, d3nhqf1, d3nhqf3, d3nhqf4, d3nhqg1, d3nhqg3, d3nhqh1, d3nhqh3
automated match to d3c2wa1
complexed with bla

Domain for 3nop:
- Domain d3nopc2: 3nop C:118-309 [214023]
  Other proteins in same PDB: d3nopc1, d3nopc3
  automated match to d3c2wa1
  complexed with bla
Domain for 3not:
- Domain d3notc2: 3not C:118-309 [214026]
  Other proteins in same PDB: d3notc1, d3notc3
  automated match to d3c2wa1
  complexed with bla
Domain for 3nou:
- Domain d3nouc2: 3nou C:118-309 [247990]
  Other proteins in same PDB: d3nouc1, d3nouc3
  automated match to d3nhqa2
  complexed with bla

More info for Protein Bacteriophytochrome BphP from d.110.2.1: GAF domain

Timeline for Protein Bacteriophytochrome BphP from d.110.2.1: GAF domain:

Protein Bacteriophytochrome BphP from d.110.2.1: GAF domain first appeared in SCOP 1.75
Protein Bacteriophytochrome BphP from d.110.2.1: GAF domain appears in SCOPe 2.05
Protein Bacteriophytochrome BphP from d.110.2.1: GAF domain appears in SCOPe 2.07
Protein Bacteriophytochrome BphP from d.110.2.1: GAF domain appears in the current release, SCOPe 2.08