SCOPe 2.08: Domain d1ignb1: 1ign B:360-445

Lineage for d1ignb1 (1ign B:360-445)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.1: Homeodomain-like [46689] (21 families)
   consists only of helices

5. Family a.4.1.6: DNA-binding domain of rap1 [46753] (3 proteins)
   duplication: consist of two domains of this fold

6. Protein DNA-binding domain of rap1, N-terminal domain [418894] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [419294] (1 PDB entry)

8. Domain d1ignb1: 1ign B:360-445 [16050]
   Other proteins in same PDB: d1igna2, d1ignb2
   protein/DNA complex
   has additional insertions and/or extensions that are not grouped together

Details for d1ignb1

PDB Entry: 1ign, 2.25 Å

PDB Description: dna-binding domain of rap1 in complex with telomeric dna site

PDB Compounds: (B:) protein (rap1)

SCOPe Domain Sequences for d1ignb1:

Sequence; same for both SEQRES and ATOM records:

>d1ignb1 a.4.1.6 (B:360-445) DNA-binding domain of rap1, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
kasftdeedefildvvrknptrrtthtlydeishyvpnhtgnsirhrfrvylskrleyvy
evdkfgklvrdddgnliktkvlppsi

Timeline for d1ignb1:

• d1ignb1 first appeared (with stable ids) in SCOP 1.55
  
• d1ignb1 appears in SCOPe 2.07