SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: DsrA insert domain

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2172289Superfamily d.58.1: 4Fe-4S ferredoxins [54862] (7 families) (S)
  5. 2172425Family d.58.1.5: Ferredoxin domains from multidomain proteins [54884] (14 protein domains)
    members of this "family" may be more closely related to other ferredoxins than to each other
  6. 2172462Protein DsrA insert domain [160280] (2 species)

Species:

  1. 2172463Archaeoglobus fulgidus [TaxId:2234] [160282] (8 PDB entries)
    Uniprot Q59109 240-305
    1. Domains for 3mm5:
      1. 2172464Domain d3mm5a3: 3mm5 A:239-304 [213368]
        Other proteins in same PDB: d3mm5a1, d3mm5a2, d3mm5b1, d3mm5b2, d3mm5b3, d3mm5d1, d3mm5d2, d3mm5e1, d3mm5e2, d3mm5e3
        automated match to d3mmca1
        complexed with sf4, so3, srm
      2. 2172465Domain d3mm5d3: 3mm5 D:239-304 [213374]
        Other proteins in same PDB: d3mm5a1, d3mm5a2, d3mm5b1, d3mm5b2, d3mm5b3, d3mm5d1, d3mm5d2, d3mm5e1, d3mm5e2, d3mm5e3
        automated match to d3mmca1
        complexed with sf4, so3, srm
    2. Domains for 3mm6:
      1. 2172466Domain d3mm6a3: 3mm6 A:239-304 [213380]
        Other proteins in same PDB: d3mm6a1, d3mm6a2, d3mm6b1, d3mm6b2, d3mm6b3, d3mm6d1, d3mm6d2, d3mm6e1, d3mm6e2, d3mm6e3
        automated match to d3mmca1
        complexed with cyn, sf4, srm
      2. 2172467Domain d3mm6d3: 3mm6 D:239-304 [213386]
        Other proteins in same PDB: d3mm6a1, d3mm6a2, d3mm6b1, d3mm6b2, d3mm6b3, d3mm6d1, d3mm6d2, d3mm6e1, d3mm6e2, d3mm6e3
        automated match to d3mmca1
        complexed with cyn, sf4, srm
    3. Domains for 3mm7:
      1. 2172468Domain d3mm7a3: 3mm7 A:239-304 [213392]
        Other proteins in same PDB: d3mm7a1, d3mm7a2, d3mm7b1, d3mm7b2, d3mm7b3, d3mm7d1, d3mm7d2, d3mm7e1, d3mm7e2, d3mm7e3
        automated match to d3mmca1
        complexed with cmo, sf4, srm
      2. 2172469Domain d3mm7d3: 3mm7 D:239-304 [213398]
        Other proteins in same PDB: d3mm7a1, d3mm7a2, d3mm7b1, d3mm7b2, d3mm7b3, d3mm7d1, d3mm7d2, d3mm7e1, d3mm7e2, d3mm7e3
        automated match to d3mmca1
        complexed with cmo, sf4, srm
    4. Domains for 3mm8:
      1. 2172476Domain d3mm8a3: 3mm8 A:239-304 [213404]
        Other proteins in same PDB: d3mm8a1, d3mm8a2, d3mm8b1, d3mm8b2, d3mm8b3, d3mm8d1, d3mm8d2, d3mm8e1, d3mm8e2, d3mm8e3
        automated match to d3mmca1
        complexed with no3, sf4, srm
      2. 2172477Domain d3mm8d3: 3mm8 D:239-304 [213410]
        Other proteins in same PDB: d3mm8a1, d3mm8a2, d3mm8b1, d3mm8b2, d3mm8b3, d3mm8d1, d3mm8d2, d3mm8e1, d3mm8e2, d3mm8e3
        automated match to d3mmca1
        complexed with no3, sf4, srm
    5. Domains for 3mm9:
      1. 2172472Domain d3mm9a3: 3mm9 A:239-304 [213416]
        Other proteins in same PDB: d3mm9a1, d3mm9a2, d3mm9b1, d3mm9b2, d3mm9b3, d3mm9d1, d3mm9d2, d3mm9e1, d3mm9e2, d3mm9e3
        automated match to d3mmca1
        complexed with no2, sf4, srm
      2. 2172473Domain d3mm9d3: 3mm9 D:239-304 [213422]
        Other proteins in same PDB: d3mm9a1, d3mm9a2, d3mm9b1, d3mm9b2, d3mm9b3, d3mm9d1, d3mm9d2, d3mm9e1, d3mm9e2, d3mm9e3
        automated match to d3mmca1
        complexed with no2, sf4, srm
    6. Domains for 3mma:
      1. 2172474Domain d3mmaa3: 3mma A:239-304 [213428]
        Other proteins in same PDB: d3mmaa1, d3mmaa2, d3mmab1, d3mmab2, d3mmab3, d3mmad1, d3mmad2, d3mmae1, d3mmae2, d3mmae3
        automated match to d3mmca1
        complexed with po4, sf4, srm
      2. 2172475Domain d3mmad3: 3mma D:239-304 [213434]
        Other proteins in same PDB: d3mmaa1, d3mmaa2, d3mmab1, d3mmab2, d3mmab3, d3mmad1, d3mmad2, d3mmae1, d3mmae2, d3mmae3
        automated match to d3mmca1
        complexed with po4, sf4, srm
    7. Domains for 3mmb:
      1. 2172478Domain d3mmba3: 3mmb A:239-304 [213440]
        Other proteins in same PDB: d3mmba1, d3mmba2, d3mmbb1, d3mmbb2, d3mmbb3, d3mmbd1, d3mmbd2, d3mmbe1, d3mmbe2, d3mmbe3
        automated match to d3mmca1
        complexed with h2s, sf4, srm
      2. 2172479Domain d3mmbd3: 3mmb D:239-304 [213446]
        Other proteins in same PDB: d3mmba1, d3mmba2, d3mmbb1, d3mmbb2, d3mmbb3, d3mmbd1, d3mmbd2, d3mmbe1, d3mmbe2, d3mmbe3
        automated match to d3mmca1
        complexed with h2s, sf4, srm
    8. Domains for 3mmc:
      1. 2172470Domain d3mmca1: 3mmc A:239-304 [181406]
        Other proteins in same PDB: d3mmca2, d3mmca3, d3mmcb1, d3mmcb2, d3mmcb3, d3mmcd2, d3mmcd3, d3mmce1, d3mmce2, d3mmce3
        complexed with gol, sf4, srm
      2. 2172471Domain d3mmcd1: 3mmc D:239-304 [181412]
        Other proteins in same PDB: d3mmca2, d3mmca3, d3mmcb1, d3mmcb2, d3mmcb3, d3mmcd2, d3mmcd3, d3mmce1, d3mmce2, d3mmce3
        automated match to d3mmca1
        complexed with gol, sf4, srm
  2. 2172480Desulfovibrio vulgaris [TaxId:881] [160281] (1 PDB entry)
    Uniprot P45574 242-322

More info for Protein DsrA insert domain from d.58.1.5: Ferredoxin domains from multidomain proteins

Timeline for Protein DsrA insert domain from d.58.1.5: Ferredoxin domains from multidomain proteins: