SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Archaeoglobus fulgidus [TaxId: 2234]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2172289Superfamily d.58.1: 4Fe-4S ferredoxins [54862] (7 families) (S)
  5. 2172425Family d.58.1.5: Ferredoxin domains from multidomain proteins [54884] (14 protein domains)
    members of this "family" may be more closely related to other ferredoxins than to each other
  6. 2172483Protein DsrB insert domain [160277] (2 species)
  7. 2172484Species Archaeoglobus fulgidus [TaxId:2234] [160279] (9 PDB entries)
    Uniprot Q59110 197-261

PDB entries in Species: Archaeoglobus fulgidus [TaxId: 2234]:

  1. Domain(s) for 3c7b:
    1. 2172491Domain d3c7bb6: 3c7b B:197-261 [305150]
      Other proteins in same PDB: d3c7bb4, d3c7bb5, d3c7be4, d3c7be5
      automated match to d3mmcb1
      complexed with sf4, so3, srm
    2. 2172492Domain d3c7be6: 3c7b E:197-261 [305153]
      Other proteins in same PDB: d3c7bb4, d3c7bb5, d3c7be4, d3c7be5
      automated match to d3mmcb1
      complexed with sf4, so3, srm
  2. Domain(s) for 3mm5:
    1. 2172485Domain d3mm5b3: 3mm5 B:197-261 [213371]
      Other proteins in same PDB: d3mm5a1, d3mm5a2, d3mm5a3, d3mm5b1, d3mm5b2, d3mm5d1, d3mm5d2, d3mm5d3, d3mm5e1, d3mm5e2
      automated match to d3mmcb1
      complexed with sf4, so3, srm
    2. 2172486Domain d3mm5e3: 3mm5 E:197-261 [213377]
      Other proteins in same PDB: d3mm5a1, d3mm5a2, d3mm5a3, d3mm5b1, d3mm5b2, d3mm5d1, d3mm5d2, d3mm5d3, d3mm5e1, d3mm5e2
      automated match to d3mmcb1
      complexed with sf4, so3, srm
  3. Domain(s) for 3mm6:
    1. 2172487Domain d3mm6b3: 3mm6 B:197-261 [213383]
      Other proteins in same PDB: d3mm6a1, d3mm6a2, d3mm6a3, d3mm6b1, d3mm6b2, d3mm6d1, d3mm6d2, d3mm6d3, d3mm6e1, d3mm6e2
      automated match to d3mmcb1
      complexed with cyn, sf4, srm
    2. 2172488Domain d3mm6e3: 3mm6 E:197-261 [213389]
      Other proteins in same PDB: d3mm6a1, d3mm6a2, d3mm6a3, d3mm6b1, d3mm6b2, d3mm6d1, d3mm6d2, d3mm6d3, d3mm6e1, d3mm6e2
      automated match to d3mmcb1
      complexed with cyn, sf4, srm
  4. Domain(s) for 3mm7:
    1. 2172489Domain d3mm7b3: 3mm7 B:197-261 [213395]
      Other proteins in same PDB: d3mm7a1, d3mm7a2, d3mm7a3, d3mm7b1, d3mm7b2, d3mm7d1, d3mm7d2, d3mm7d3, d3mm7e1, d3mm7e2
      automated match to d3mmcb1
      complexed with cmo, sf4, srm
    2. 2172490Domain d3mm7e3: 3mm7 E:197-261 [213401]
      Other proteins in same PDB: d3mm7a1, d3mm7a2, d3mm7a3, d3mm7b1, d3mm7b2, d3mm7d1, d3mm7d2, d3mm7d3, d3mm7e1, d3mm7e2
      automated match to d3mmcb1
      complexed with cmo, sf4, srm
  5. Domain(s) for 3mm8:
    1. 2172499Domain d3mm8b3: 3mm8 B:197-261 [213407]
      Other proteins in same PDB: d3mm8a1, d3mm8a2, d3mm8a3, d3mm8b1, d3mm8b2, d3mm8d1, d3mm8d2, d3mm8d3, d3mm8e1, d3mm8e2
      automated match to d3mmcb1
      complexed with no3, sf4, srm
    2. 2172500Domain d3mm8e3: 3mm8 E:197-261 [213413]
      Other proteins in same PDB: d3mm8a1, d3mm8a2, d3mm8a3, d3mm8b1, d3mm8b2, d3mm8d1, d3mm8d2, d3mm8d3, d3mm8e1, d3mm8e2
      automated match to d3mmcb1
      complexed with no3, sf4, srm
  6. Domain(s) for 3mm9:
    1. 2172495Domain d3mm9b3: 3mm9 B:197-261 [213419]
      Other proteins in same PDB: d3mm9a1, d3mm9a2, d3mm9a3, d3mm9b1, d3mm9b2, d3mm9d1, d3mm9d2, d3mm9d3, d3mm9e1, d3mm9e2
      automated match to d3mmcb1
      complexed with no2, sf4, srm
    2. 2172496Domain d3mm9e3: 3mm9 E:197-261 [213425]
      Other proteins in same PDB: d3mm9a1, d3mm9a2, d3mm9a3, d3mm9b1, d3mm9b2, d3mm9d1, d3mm9d2, d3mm9d3, d3mm9e1, d3mm9e2
      automated match to d3mmcb1
      complexed with no2, sf4, srm
  7. Domain(s) for 3mma:
    1. 2172497Domain d3mmab3: 3mma B:197-261 [213431]
      Other proteins in same PDB: d3mmaa1, d3mmaa2, d3mmaa3, d3mmab1, d3mmab2, d3mmad1, d3mmad2, d3mmad3, d3mmae1, d3mmae2
      automated match to d3mmcb1
      complexed with po4, sf4, srm
    2. 2172498Domain d3mmae3: 3mma E:197-261 [213437]
      Other proteins in same PDB: d3mmaa1, d3mmaa2, d3mmaa3, d3mmab1, d3mmab2, d3mmad1, d3mmad2, d3mmad3, d3mmae1, d3mmae2
      automated match to d3mmcb1
      complexed with po4, sf4, srm
  8. Domain(s) for 3mmb:
    1. 2172501Domain d3mmbb3: 3mmb B:197-261 [213443]
      Other proteins in same PDB: d3mmba1, d3mmba2, d3mmba3, d3mmbb1, d3mmbb2, d3mmbd1, d3mmbd2, d3mmbd3, d3mmbe1, d3mmbe2
      automated match to d3mmcb1
      complexed with h2s, sf4, srm
    2. 2172502Domain d3mmbe3: 3mmb E:197-261 [213449]
      Other proteins in same PDB: d3mmba1, d3mmba2, d3mmba3, d3mmbb1, d3mmbb2, d3mmbd1, d3mmbd2, d3mmbd3, d3mmbe1, d3mmbe2
      automated match to d3mmcb1
      complexed with h2s, sf4, srm
  9. Domain(s) for 3mmc:
    1. 2172493Domain d3mmcb1: 3mmc B:197-261 [181409]
      Other proteins in same PDB: d3mmca1, d3mmca2, d3mmca3, d3mmcb2, d3mmcb3, d3mmcd1, d3mmcd2, d3mmcd3, d3mmce2, d3mmce3
      complexed with gol, sf4, srm
    2. 2172494Domain d3mmce1: 3mmc E:197-261 [181415]
      Other proteins in same PDB: d3mmca1, d3mmca2, d3mmca3, d3mmcb2, d3mmcb3, d3mmcd1, d3mmcd2, d3mmcd3, d3mmce2, d3mmce3
      automated match to d3mmcb1
      complexed with gol, sf4, srm

More info for Species Archaeoglobus fulgidus [TaxId:2234] from d.58.1.5 DsrB insert domain

Timeline for Species Archaeoglobus fulgidus [TaxId:2234] from d.58.1.5 DsrB insert domain: