Structural Classification of Proteins and ASTRAL release 1.75B (January 2013)
Search SCOP (example):

Lineage for Species: Shewanella oneidensis [TaxId: 70863]

  1. Root: SCOP 1.75B
  2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. Fold d.17: Cystatin-like [54402] (7 superfamilies)
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. Superfamily d.17.4: NTF2-like [54427] (31 families) (S)
    has a beta-alpha(2)-beta insertion after the main helix
  5. Family d.17.4.16: SO0125-like [159991] (2 protein domains)
    PfamB PB003666
  6. Protein Uncharacterized protein SO0125 [159994] (1 species)
  7. Species Shewanella oneidensis [TaxId:70863] [159995] (1 PDB entry)
    Uniprot Q8EKG8 1-121

PDB entry in Species: Shewanella oneidensis [TaxId: 70863]:

More info for Species Shewanella oneidensis [TaxId:70863] from d.17.4.16 Uncharacterized protein SO0125

Timeline for Species Shewanella oneidensis [TaxId:70863] from d.17.4.16 Uncharacterized protein SO0125 :

Species Shewanella oneidensis [TaxId:70863] from d.17.4.16 Uncharacterized protein SO0125 appears in SCOP 1.75A


SCOP Copyright © 1994-2013 The SCOP and Astral authors
scop@mrc-lmb.cam.ac.uk and astral@compbio.berkeley.edu