Lineage for Protein: 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2106806Fold c.30: PreATP-grasp domain [52439] (1 superfamily)
    3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
    possible rudiment form of Rossmann-fold domain
  4. 2106807Superfamily c.30.1: PreATP-grasp domain [52440] (10 families) (S)
    precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function
  5. 2107066Family c.30.1.8: PurP N-terminal domain-like [159526] (1 protein)
    Pfam PF06849; DUF1246
  6. 2107067Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP [159527] (3 species)

Species:

  1. 2107068Methanocaldococcus jannaschii [TaxId:2190] [159530] (4 PDB entries)
    Uniprot Q57600 1-123
    1. Domain for 2r7k:
    2. Domain for 2r7l:
    3. Domain for 2r7m:
    4. Domain for 2r7n:
  2. 2107073Pyrococcus furiosus [TaxId:2261] [159528] (4 PDB entries)
    Uniprot Q8U0R7 1-99
    1. Domains for 2r84:
      1. 2107076Domain d2r84a1: 2r84 A:1-99 [151672]
        Other proteins in same PDB: d2r84a2, d2r84b2
        complexed with amp, amz, cl, mpd, na
      2. 2107077Domain d2r84b1: 2r84 B:1-99 [151674]
        Other proteins in same PDB: d2r84a2, d2r84b2
        automated match to d2r84a1
        complexed with amp, amz, cl, mpd, na
    2. Domains for 2r85:
      1. 2107074Domain d2r85a1: 2r85 A:1-99 [151676]
        Other proteins in same PDB: d2r85a2, d2r85b2
        automated match to d2r84a1
        complexed with amp, cl, mpd, na
      2. 2107075Domain d2r85b1: 2r85 B:1-99 [151678]
        Other proteins in same PDB: d2r85a2, d2r85b2
        automated match to d2r84a1
        complexed with amp, cl, mpd, na
    3. Domains for 2r86:
      1. 2107084Domain d2r86a1: 2r86 A:1-99 [151680]
        Other proteins in same PDB: d2r86a2, d2r86b2
        automated match to d2r84a1
        complexed with atp, mpd, na, po4
      2. 2107085Domain d2r86b1: 2r86 B:1-99 [151682]
        Other proteins in same PDB: d2r86a2, d2r86b2
        automated match to d2r84a1
        complexed with atp, mpd, na, po4
    4. Domains for 2r87:
      1. 2107078Domain d2r87a1: 2r87 A:1-99 [151684]
        Other proteins in same PDB: d2r87a2, d2r87b2, d2r87c2, d2r87d2, d2r87e2, d2r87f2
        automated match to d2r84a1
        complexed with adp, po4
      2. 2107079Domain d2r87b1: 2r87 B:1-99 [151686]
        Other proteins in same PDB: d2r87a2, d2r87b2, d2r87c2, d2r87d2, d2r87e2, d2r87f2
        automated match to d2r84a1
        complexed with adp, po4
      3. 2107080Domain d2r87c1: 2r87 C:1-99 [151688]
        Other proteins in same PDB: d2r87a2, d2r87b2, d2r87c2, d2r87d2, d2r87e2, d2r87f2
        automated match to d2r84a1
        complexed with adp, po4
      4. 2107081Domain d2r87d1: 2r87 D:1-99 [151690]
        Other proteins in same PDB: d2r87a2, d2r87b2, d2r87c2, d2r87d2, d2r87e2, d2r87f2
        automated match to d2r84a1
        complexed with adp, po4
      5. 2107082Domain d2r87e1: 2r87 E:1-99 [151692]
        Other proteins in same PDB: d2r87a2, d2r87b2, d2r87c2, d2r87d2, d2r87e2, d2r87f2
        automated match to d2r84a1
        complexed with adp, po4
      6. 2107083Domain d2r87f1: 2r87 F:1-99 [151694]
        Other proteins in same PDB: d2r87a2, d2r87b2, d2r87c2, d2r87d2, d2r87e2, d2r87f2
        automated match to d2r84a1
        complexed with adp, po4
  3. 2107086Thermococcus kodakaraensis [TaxId:311400] [159529] (1 PDB entry)
    Uniprot Q5JD28 2-97

More info for Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP from c.30.1.8: PurP N-terminal domain-like

Timeline for Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP from c.30.1.8: PurP N-terminal domain-like:

  • Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP from c.30.1.8: PurP N-terminal domain-like first appeared in SCOP 1.75
  • Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP from c.30.1.8: PurP N-terminal domain-like appears in SCOPe 2.05