Lineage for Species: Methanococcus jannaschii [TaxId: 2190]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2150174Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2150175Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2150286Family c.116.1.6: EMG1/NEP1-like [159513] (3 protein domains)
    Pfam PF03587; structurally most similar to the AF1056-like family, but more decorated
  6. 2150291Protein Ribosome biogenesis protein NEP1 [159514] (1 species)
  7. 2150292Species Methanococcus jannaschii [TaxId:2190] [159515] (3 PDB entries)
    Uniprot Q57977 2-205

PDB entries in Species: Methanococcus jannaschii [TaxId: 2190]:

  1. Domain(s) for 3bbd:
    1. 2150293Domain d3bbda1: 3bbd A:2-205 [155061]
      protein/RNA complex; complexed with gol, sah
    2. 2150294Domain d3bbdb_: 3bbd B: [155062]
      automated match to d3bbda1
      protein/RNA complex; complexed with gol, sah
  2. Domain(s) for 3bbe:
    1. 2150295Domain d3bbea_: 3bbe A: [155063]
      automated match to d3bbda1
      complexed with gol
    2. 2150296Domain d3bbeb_: 3bbe B: [155064]
      automated match to d3bbda1
      complexed with gol
  3. Domain(s) for 3bbh:
    1. 2150297Domain d3bbha_: 3bbh A: [155071]
      automated match to d3bbda1
      protein/RNA complex; complexed with gol, sfg
    2. 2150298Domain d3bbhb_: 3bbh B: [155072]
      automated match to d3bbda1
      protein/RNA complex; complexed with gol, sfg

More info for Species Methanococcus jannaschii [TaxId:2190] from c.116.1.6 Ribosome biogenesis protein NEP1

Timeline for Species Methanococcus jannaschii [TaxId:2190] from c.116.1.6 Ribosome biogenesis protein NEP1: