SCOPe 2.04: Family c.116.1.6: EMG1/NEP1-like

Lineage for Family c.116.1.6: EMG1/NEP1-like

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.116: alpha/beta knot [75216] (1 superfamily)
   core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot

4. Superfamily c.116.1: alpha/beta knot [75217] (9 families)
   known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
   all known members have dimeric structures

5. Family c.116.1.6: EMG1/NEP1-like [159513] (3 proteins)
   Pfam PF03587; structurally most similar to the AF1056-like family, but more decorated

Proteins:

1. Essential for mitotic growth 1, EMG1 [159516] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [159517] (2 PDB entries)
     Uniprot Q06287 23-251

2. Ribosome biogenesis protein NEP1 [159514] (1 species)

   • Species Methanococcus jannaschii [TaxId:2190] [159515] (3 PDB entries)
     Uniprot Q57977 2-205

3. automated matches [227048] (1 species)
   not a true protein

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [226029] (1 PDB entry)

More info for Family c.116.1.6: EMG1/NEP1-like

Timeline for Family c.116.1.6: EMG1/NEP1-like:

• Family c.116.1.6: EMG1/NEP1-like first appeared in SCOP 1.75
  
• Family c.116.1.6: EMG1/NEP1-like appears in SCOPe 2.03
  
• Family c.116.1.6: EMG1/NEP1-like appears in SCOPe 2.05
  
• Family c.116.1.6: EMG1/NEP1-like appears in the current release, SCOPe 2.08