Lineage for Protein: E3 ubiquitin-protein ligase UHRF1

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2076966Fold b.122: PUA domain-like [88696] (1 superfamily)
    pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other
  4. 2076967Superfamily b.122.1: PUA domain-like [88697] (14 families) (S)
  5. 2077175Family b.122.1.12: SRA domain-like [159368] (2 protein domains)
    Pfam PF02182; recognizes the modified cytosine base (m5C) by flipping it out of DNA
  6. 2077176Protein E3 ubiquitin-protein ligase UHRF1 [159369] (2 species)

Species:

  1. 2077177Human (Homo sapiens) [TaxId:9606] [159370] (4 PDB entries)
    Uniprot Q96T88 409-615! Uniprot Q96T88 414-617
    1. Domain for 2pb7:
    2. Domain for 3bi7:
    3. Domains for 3clz:
      1. 2077181Domain d3clza2: 3clz A:416-617 [156766]
        Other proteins in same PDB: d3clza3, d3clzb3, d3clzc3, d3clzd3
        automated match to d3bi7a1
      2. 2077182Domain d3clzb2: 3clz B:415-617 [156767]
        Other proteins in same PDB: d3clza3, d3clzb3, d3clzc3, d3clzd3
        automated match to d3bi7a1
      3. 2077183Domain d3clzc2: 3clz C:416-617 [156768]
        Other proteins in same PDB: d3clza3, d3clzb3, d3clzc3, d3clzd3
        automated match to d3bi7a1
      4. 2077184Domain d3clzd2: 3clz D:416-617 [156769]
        Other proteins in same PDB: d3clza3, d3clzb3, d3clzc3, d3clzd3
        automated match to d3bi7a1
    4. Domain for 3dwh:
  2. 2077185Mouse (Mus musculus) [TaxId:10090] [159371] (10 PDB entries)
    Uniprot Q8VDF2 405-613! Uniprot Q8VDF2 418-625
    1. Domains for 2zkd:
      1. 2077188Domain d2zkda1: 2zkd A:405-613 [154583]
        protein/DNA complex; complexed with act, edo
      2. 2077189Domain d2zkdb_: 2zkd B: [154584]
        automated match to d2zkda1
        protein/DNA complex; complexed with act, edo
    2. Domain for 2zke:
    3. Domain for 2zkf:
    4. Domains for 2zkg:
      1. 2077190Domain d2zkga_: 2zkg A: [171282]
        automated match to d2zkda1
        complexed with edo
      2. 2077191Domain d2zkgb_: 2zkg B: [171283]
        automated match to d2zkda1
        complexed with edo
      3. 2077192Domain d2zkgc_: 2zkg C: [171284]
        automated match to d2zkda1
        complexed with edo
      4. 2077193Domain d2zkgd_: 2zkg D: [171285]
        automated match to d2zkda1
        complexed with edo
    5. Domain for 2zo0:
    6. Domain for 2zo1:
    7. Domain for 2zo2:
    8. Domains for 3f8i:
      1. 2077197Domain d3f8ia1: 3f8i A:419-622 [175570]
        Other proteins in same PDB: d3f8ia2, d3f8ib2
        automated match to d2zo0b1
        protein/DNA complex
      2. 2077198Domain d3f8ib1: 3f8i B:419-622 [175571]
        Other proteins in same PDB: d3f8ia2, d3f8ib2
        automated match to d2zo0b1
        protein/DNA complex
    9. Domain for 3f8j:
    10. Domains for 3fde:
      1. 2077186Domain d3fdea1: 3fde A:419-626 [175707]
        Other proteins in same PDB: d3fdea2, d3fdeb2
        automated match to d2zo0b1
        complexed with edo, na, unl
      2. 2077187Domain d3fdeb1: 3fde B:419-622 [175708]
        Other proteins in same PDB: d3fdea2, d3fdeb2
        automated match to d2zo0b1
        complexed with edo, na, unl

More info for Protein E3 ubiquitin-protein ligase UHRF1 from b.122.1.12: SRA domain-like

Timeline for Protein E3 ubiquitin-protein ligase UHRF1 from b.122.1.12: SRA domain-like: