SCOPe 2.06: Species: Shewanella oneidensis [TaxId: 70863]

Lineage for Species: Shewanella oneidensis [TaxId: 70863]

Root: SCOPe 2.06
Class b: All beta proteins [48724] (177 folds)
Fold b.106: Phage tail proteins [69278] (1 superfamily)
core: barrel; n=6, S=10; greek-key; topologically similar to the FMN-binding split barrel
Superfamily b.106.1: Phage tail proteins [69279] (3 families)

Family b.106.1.1: Baseplate protein-like [69280] (3 proteins)
duplication: consists of two similar barrel domains that differ by the first strand directions; the barrels are differently decorated by alpha+beta insertions

Protein Baseplate protein gpP [159179] (3 species)
43 kda tail protein; Pfam PF06893
Species Shewanella oneidensis [TaxId:70863] [159182] (1 PDB entry)
Uniprot Q8EDP4 181-348! Uniprot Q8EDP4 2-180
Prophage MuSo2

PDB entry in Species: Shewanella oneidensis [TaxId: 70863]:

Domain(s) for 3cdd:
1. Domain d3cdda1: 3cdd A:181-348 [156500]
  Other proteins in same PDB: d3cdde3
2. Domain d3cdda2: 3cdd A:2-180 [156501]
  Other proteins in same PDB: d3cdde3
3. Domain d3cddb1: 3cdd B:181-345 [156502]
  Other proteins in same PDB: d3cdde3
  automated match to d3cdda1
4. Domain d3cddb2: 3cdd B:3-180 [156503]
  Other proteins in same PDB: d3cdde3
  automated match to d3cdda2
5. Domain d3cddc1: 3cdd C:181-343 [156504]
  Other proteins in same PDB: d3cdde3
  automated match to d3cdda1
6. Domain d3cddc2: 3cdd C:3-180 [156505]
  Other proteins in same PDB: d3cdde3
  automated match to d3cdda2
7. Domain d3cddd1: 3cdd D:181-343 [156506]
  Other proteins in same PDB: d3cdde3
  automated match to d3cdda1
8. Domain d3cddd2: 3cdd D:2-180 [156507]
  Other proteins in same PDB: d3cdde3
  automated match to d3cdda2
9. Domain d3cdde1: 3cdd E:181-343 [156508]
  Other proteins in same PDB: d3cdde3
  automated match to d3cdda1
10. Domain d3cdde2: 3cdd E:2-180 [156509]
  Other proteins in same PDB: d3cdde3
  automated match to d3cdda2
11. Domain d3cddf1: 3cdd F:181-345 [156510]
  Other proteins in same PDB: d3cdde3
  automated match to d3cdda1
12. Domain d3cddf2: 3cdd F:3-180 [156511]
  Other proteins in same PDB: d3cdde3
  automated match to d3cdda2

More info for Species Shewanella oneidensis [TaxId:70863] from b.106.1.1 Baseplate protein gpP

Timeline for Species Shewanella oneidensis [TaxId:70863] from b.106.1.1 Baseplate protein gpP:

Species Shewanella oneidensis [TaxId:70863] from b.106.1.1 Baseplate protein gpP first appeared in SCOP 1.75
Species Shewanella oneidensis [TaxId:70863] from b.106.1.1 Baseplate protein gpP appears in SCOPe 2.05
Species Shewanella oneidensis [TaxId:70863] from b.106.1.1 Baseplate protein gpP last appears in SCOPe 2.07