Lineage for Species: Thermococcus kodakaraensis [TaxId: 311400]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2787872Fold b.40: OB-fold [50198] (17 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2791216Superfamily b.40.14: HupF/HypC-like [159127] (1 family) (S)
    contains extra C-terminal helix packed against the beta-barrel side
    automatically mapped to Pfam PF01455
  5. 2791217Family b.40.14.1: HupF/HypC-like [159128] (1 protein)
    Pfam PF01455
  6. 2791218Protein Hydrogenase expression/formation protein HypC [159129] (3 species)
  7. 2791224Species Thermococcus kodakaraensis [TaxId:311400] [159132] (5 PDB entries)
    Uniprot Q5JII0 2-72

PDB entries in Species: Thermococcus kodakaraensis [TaxId: 311400]:

  1. Domain(s) for 2z1c:
    1. 2791225Domain d2z1ca1: 2z1c A:2-72 [153929]
      complexed with gol, pg4
    2. 2791226Domain d2z1cb_: 2z1c B: [153930]
      automated match to d2z1ca1
      complexed with gol, pg4
    3. 2791227Domain d2z1cc_: 2z1c C: [153931]
      automated match to d2z1ca1
      complexed with gol, pg4
  2. Domain(s) for 3vyr:
  3. Domain(s) for 3vys:
    • 2791230Domain d3vysa_: 3vys A: [193348]
      automated match to d2z1cb_
      complexed with mg, sf4

      missing some secondary structures that made up less than one-third of the common domain
  4. Domain(s) for 3vyt:
    • 2791228Domain d3vyta_: 3vyt A: [218152]
      automated match to d3vysa_
      complexed with cl, mg, sf4

      missing some secondary structures that made up less than one-third of the common domain
  5. Domain(s) for 3vyu:
    • 2791231Domain d3vyua_: 3vyu A: [218153]
      Other proteins in same PDB: d3vyuc1, d3vyuc2
      automated match to d3vysa_
      complexed with sf4

      missing some secondary structures that made up less than one-third of the common domain

More info for Species Thermococcus kodakaraensis [TaxId:311400] from b.40.14.1 Hydrogenase expression/formation protein HypC

Timeline for Species Thermococcus kodakaraensis [TaxId:311400] from b.40.14.1 Hydrogenase expression/formation protein HypC: