Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2049950Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2051128Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families) (S)
  5. 2051511Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (31 protein domains)
    barrel, closed; n=5, S=8
  6. 2051571Protein Exoribonuclease 2, RNB [159089] (1 species)
    RNase II; contains 3 S1-like domains in addition to an OB-fold embedded in the catalytic domain
  7. 2051572Species Escherichia coli [TaxId:562] [159090] (3 PDB entries)
    Uniprot P30850 1-82! Uniprot P30850 4-82! Uniprot P30850 5-82! Uniprot P30850 558-643! Uniprot P30850 558-644! Uniprot P30850 83-172

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 2id0:
    1. 2051576Domain d2id0a1: 2id0 A:558-644 [147606]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      complexed with mn
    2. 2051577Domain d2id0a2: 2id0 A:83-172 [147607]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      complexed with mn
    3. 2051578Domain d2id0a3: 2id0 A:5-82 [147608]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      complexed with mn
    4. 2051579Domain d2id0b1: 2id0 B:558-644 [147610]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      automated match to d2id0a1
      complexed with mn
    5. 2051580Domain d2id0b2: 2id0 B:83-172 [147611]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      automated match to d2id0a2
      complexed with mn
    6. 2051581Domain d2id0b3: 2id0 B:5-82 [147612]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      automated match to d2id0a3
      complexed with mn
    7. 2051582Domain d2id0c1: 2id0 C:558-644 [147614]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      automated match to d2id0a1
      complexed with mn
    8. 2051583Domain d2id0c2: 2id0 C:83-172 [147615]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      automated match to d2id0a2
      complexed with mn
    9. 2051584Domain d2id0c3: 2id0 C:5-82 [147616]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      automated match to d2id0a3
      complexed with mn
    10. 2051585Domain d2id0d1: 2id0 D:558-644 [147618]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      automated match to d2id0a1
      complexed with mn
    11. 2051586Domain d2id0d2: 2id0 D:83-172 [147619]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      automated match to d2id0a2
      complexed with mn
    12. 2051587Domain d2id0d3: 2id0 D:5-82 [147620]
      Other proteins in same PDB: d2id0a4, d2id0b4, d2id0c4, d2id0d4
      automated match to d2id0a3
      complexed with mn
  2. Domain(s) for 2ix0:
    1. 2051573Domain d2ix0a1: 2ix0 A:83-172 [147818]
      Other proteins in same PDB: d2ix0a4
      complexed with c5p, ca, mg
    2. 2051574Domain d2ix0a2: 2ix0 A:4-82 [147819]
      Other proteins in same PDB: d2ix0a4
      complexed with c5p, ca, mg
    3. 2051575Domain d2ix0a3: 2ix0 A:558-644 [147820]
      Other proteins in same PDB: d2ix0a4
      complexed with c5p, ca, mg
  3. Domain(s) for 2ix1:
    1. 2051588Domain d2ix1a1: 2ix1 A:83-172 [147822]
      Other proteins in same PDB: d2ix1a4, d2ix1a5
      complexed with mg; mutant
    2. 2051589Domain d2ix1a2: 2ix1 A:558-643 [147823]
      Other proteins in same PDB: d2ix1a4, d2ix1a5
      complexed with mg; mutant
    3. 2051590Domain d2ix1a3: 2ix1 A:4-82 [147824]
      Other proteins in same PDB: d2ix1a4, d2ix1a5
      complexed with mg; mutant

More info for Species Escherichia coli [TaxId:562] from b.40.4.5 Exoribonuclease 2, RNB

Timeline for Species Escherichia coli [TaxId:562] from b.40.4.5 Exoribonuclease 2, RNB: