SCOPe 2.06: Species: Vibrio parahaemolyticus [TaxId: 670]

Lineage for Species: Vibrio parahaemolyticus [TaxId: 670]

Root: SCOPe 2.06
Class b: All beta proteins [48724] (177 folds)

Fold b.33: ISP domain [50021] (1 superfamily)
consists of two all-beta subdomains: conserved small domain has a rubredoxin-like fold; larger domain consists of 6 beta-stands packed in either sandwich of two 3-stranded sheets or closed barrel (n=6; S=8)

Superfamily b.33.1: ISP domain [50022] (4 families)
Family b.33.1.3: NirD-like [158991] (1 protein)
retains the common fold but lacks the Fe-S cluster
automatically mapped to Pfam PF13806
Protein NADH-nitrite reductase small subunit NirD [158992] (3 species)
Species Vibrio parahaemolyticus [TaxId:670] [158995] (1 PDB entry)
Uniprot Q87HB1 4-111

PDB entry in Species: Vibrio parahaemolyticus [TaxId: 670]:

Domain(s) for 3c0d:
1. Domain d3c0da1: 3c0d A:4-111 [155819]
  Other proteins in same PDB: d3c0da2
2. Domain d3c0db_: 3c0d B: [155820]
  Other proteins in same PDB: d3c0da2
  automated match to d3c0da1
3. Domain d3c0dc_: 3c0d C: [155821]
  Other proteins in same PDB: d3c0da2
  automated match to d3c0da1
4. Domain d3c0dd_: 3c0d D: [155822]
  Other proteins in same PDB: d3c0da2
  automated match to d3c0da1
5. Domain d3c0de_: 3c0d E: [155823]
  Other proteins in same PDB: d3c0da2
  automated match to d3c0da1
6. Domain d3c0df_: 3c0d F: [155824]
  Other proteins in same PDB: d3c0da2
  automated match to d3c0da1
7. Domain d3c0dg_: 3c0d G: [155825]
  Other proteins in same PDB: d3c0da2
  automated match to d3c0da1
8. Domain d3c0dh_: 3c0d H: [155826]
  Other proteins in same PDB: d3c0da2
  automated match to d3c0da1

More info for Species Vibrio parahaemolyticus [TaxId:670] from b.33.1.3 NADH-nitrite reductase small subunit NirD

Timeline for Species Vibrio parahaemolyticus [TaxId:670] from b.33.1.3 NADH-nitrite reductase small subunit NirD:

Species Vibrio parahaemolyticus [TaxId:670] from b.33.1.3 NADH-nitrite reductase small subunit NirD first appeared in SCOP 1.75
Species Vibrio parahaemolyticus [TaxId:670] from b.33.1.3 NADH-nitrite reductase small subunit NirD appears in SCOPe 2.05
Species Vibrio parahaemolyticus [TaxId:670] from b.33.1.3 NADH-nitrite reductase small subunit NirD appears in SCOPe 2.07
Species Vibrio parahaemolyticus [TaxId:670] from b.33.1.3 NADH-nitrite reductase small subunit NirD appears in the current release, SCOPe 2.08