SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Helicobacter pylori [TaxId: 210]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2016891Fold a.292: HP0242-like [158751] (1 superfamily)
    multihelical; intertwined homodimer of four-helical subunits, forming catenated triangular ring-like structures; pseudo knot
  4. 2016892Superfamily a.292.1: HP0242-like [158752] (1 family) (S)
    automatically mapped to Pfam PF09442
  5. 2016893Family a.292.1.1: HP0242-like [158753] (1 protein)
    Pfam PF09442; DUF2018
  6. 2016894Protein Hypothetical protein HP0242 [158754] (1 species)
  7. 2016895Species Helicobacter pylori [TaxId:210] [158755] (4 PDB entries)
    Uniprot O25025 1-93! Uniprot O25025 13-92

PDB entries in Species: Helicobacter pylori [TaxId: 210]:

  1. Domain(s) for 2bo3:
  2. Domain(s) for 2ouf:
  3. Domain(s) for 3mli:
    1. 2016899Domain d3mlia_: 3mli A: [181385]
      Other proteins in same PDB: d3mlib2, d3mlic2, d3mlid2
      automated match to d2bo3a1
      complexed with ca
    2. 2016900Domain d3mlib1: 3mli B:13-94 [181386]
      Other proteins in same PDB: d3mlib2, d3mlic2, d3mlid2
      automated match to d2bo3a1
      complexed with ca
    3. 2016901Domain d3mlic1: 3mli C:11-94 [181387]
      Other proteins in same PDB: d3mlib2, d3mlic2, d3mlid2
      automated match to d2bo3a1
      complexed with ca
    4. 2016902Domain d3mlid1: 3mli D:3-94 [181388]
      Other proteins in same PDB: d3mlib2, d3mlic2, d3mlid2
      automated match to d2bo3a1
      complexed with ca
  4. Domain(s) for 4u12:

More info for Species Helicobacter pylori [TaxId:210] from a.292.1.1 Hypothetical protein HP0242

Timeline for Species Helicobacter pylori [TaxId:210] from a.292.1.1 Hypothetical protein HP0242: