Lineage for Species: Thermus thermophilus HB8 [TaxId: 300852]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2013114Fold a.143: RPB6/omega subunit-like [63561] (1 superfamily)
    core: 2 helices and adjacent loops
  4. 2013115Superfamily a.143.1: RPB6/omega subunit-like [63562] (2 families) (S)
    the bacterial omega and eukaryotic RPB6 subunits both function in polymerase assembly; the common core is involved in conserved interactions with other subunits
  5. 2013116Family a.143.1.1: RNA polymerase omega subunit [63563] (2 protein domains)
    4 helices; irregular array
  6. 2013117Protein RNA polymerase omega subunit [63564] (3 species)
  7. 2013122Species Thermus thermophilus HB8 [TaxId:300852] [158241] (6 PDB entries)

PDB entries in Species: Thermus thermophilus HB8 [TaxId: 300852]:

  1. Domain(s) for 2o5i:
    1. 2013127Domain d2o5ie_: 2o5i E: [148602]
      Other proteins in same PDB: d2o5ia1, d2o5ia2, d2o5ib1, d2o5ib2, d2o5ic_, d2o5id_, d2o5ik1, d2o5ik2, d2o5il1, d2o5il2, d2o5im_, d2o5in_
      automated match to d1i6ve_
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
    2. 2013128Domain d2o5io_: 2o5i O: [161489]
      Other proteins in same PDB: d2o5ia1, d2o5ia2, d2o5ib1, d2o5ib2, d2o5ic_, d2o5id_, d2o5ik1, d2o5ik2, d2o5il1, d2o5il2, d2o5im_, d2o5in_
      automated match to d1i6ve_
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
  2. Domain(s) for 2o5j:
    1. 2013129Domain d2o5je_: 2o5j E: [238770]
      Other proteins in same PDB: d2o5jc_, d2o5jd_, d2o5jm_, d2o5jn_
      automated match to d1i6ve_
      protein/DNA complex; protein/RNA complex; complexed with apc, mg, zn
    2. 2013130Domain d2o5jo_: 2o5j O: [238771]
      Other proteins in same PDB: d2o5jc_, d2o5jd_, d2o5jm_, d2o5jn_
      automated match to d1i6ve_
      protein/DNA complex; protein/RNA complex; complexed with apc, mg, zn
  3. Domain(s) for 2ppb:
    1. 2013131Domain d2ppbe_: 2ppb E: [238812]
      Other proteins in same PDB: d2ppbc_, d2ppbd_, d2ppbm_, d2ppbn_
      automated match to d1i6ve_
      protein/DNA complex; protein/RNA complex; complexed with apc, mg, std, zn
    2. 2013132Domain d2ppbo_: 2ppb O: [238813]
      Other proteins in same PDB: d2ppbc_, d2ppbd_, d2ppbm_, d2ppbn_
      automated match to d1i6ve_
      protein/DNA complex; protein/RNA complex; complexed with apc, mg, std, zn
  4. Domain(s) for 3dxj:
    1. 2013133Domain d3dxje_: 3dxj E: [157929]
      Other proteins in same PDB: d3dxjc_, d3dxjd_, d3dxjf1, d3dxjf2, d3dxjf3, d3dxjm_, d3dxjn_, d3dxjp1, d3dxjp2, d3dxjp3
      automated match to d1i6ve_
      protein/DNA complex; protein/RNA complex; complexed with mg, mpd, ne6, po4, zn
    2. 2013134Domain d3dxjo_: 3dxj O: [157932]
      Other proteins in same PDB: d3dxjc_, d3dxjd_, d3dxjf1, d3dxjf2, d3dxjf3, d3dxjm_, d3dxjn_, d3dxjp1, d3dxjp2, d3dxjp3
      automated match to d1i6ve_
      protein/DNA complex; protein/RNA complex; complexed with mg, mpd, ne6, po4, zn
  5. Domain(s) for 4g7h:
    1. 2013123Domain d4g7he_: 4g7h E: [202199]
      Other proteins in same PDB: d4g7ha1, d4g7ha2, d4g7hb1, d4g7hb2, d4g7hc_, d4g7hd_, d4g7hf1, d4g7hf2, d4g7hf3, d4g7hk1, d4g7hk2, d4g7hl1, d4g7hl2, d4g7hm_, d4g7hn_, d4g7hp1, d4g7hp2, d4g7hp3
      automated match to d2o5ie_
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
    2. 2013124Domain d4g7ho_: 4g7h O: [194416]
      Other proteins in same PDB: d4g7ha1, d4g7ha2, d4g7hb1, d4g7hb2, d4g7hc_, d4g7hd_, d4g7hf1, d4g7hf2, d4g7hf3, d4g7hk1, d4g7hk2, d4g7hl1, d4g7hl2, d4g7hm_, d4g7hn_, d4g7hp1, d4g7hp2, d4g7hp3
      automated match to d3eqle_
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
  6. Domain(s) for 4g7o:
    1. 2013125Domain d4g7oe_: 4g7o E: [202210]
      Other proteins in same PDB: d4g7oa1, d4g7oa2, d4g7ob1, d4g7ob2, d4g7oc_, d4g7od_, d4g7of1, d4g7of2, d4g7of3, d4g7ok1, d4g7ok2, d4g7ol1, d4g7ol2, d4g7om_, d4g7on_, d4g7op1, d4g7op2, d4g7op3
      automated match to d2o5ie_
      protein/DNA complex; protein/RNA complex; complexed with mg, zn
    2. 2013126Domain d4g7oo_: 4g7o O: [202216]
      Other proteins in same PDB: d4g7oa1, d4g7oa2, d4g7ob1, d4g7ob2, d4g7oc_, d4g7od_, d4g7of1, d4g7of2, d4g7of3, d4g7ok1, d4g7ok2, d4g7ol1, d4g7ol2, d4g7om_, d4g7on_, d4g7op1, d4g7op2, d4g7op3
      automated match to d2o5ie_
      protein/DNA complex; protein/RNA complex; complexed with mg, zn

More info for Species Thermus thermophilus HB8 [TaxId:300852] from a.143.1.1 RNA polymerase omega subunit

Timeline for Species Thermus thermophilus HB8 [TaxId:300852] from a.143.1.1 RNA polymerase omega subunit: