SCOPe 2.08: Domain d3efbd_: 3efb D:

Lineage for d3efbd_ (3efb D:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.124: NagB/RpiA/CoA transferase-like [100949] (1 superfamily)
   core: 3 layers: a/b/a; parallel or mixed beta-sheet of 6 strands, order 321456

4. Superfamily c.124.1: NagB/RpiA/CoA transferase-like [100950] (9 families)

5. Family c.124.1.8: SorC sugar-binding domain-like [159545] (6 proteins)
   Pfam PF04198

6. Protein automated matches [190970] (1 species)
   not a true protein

7. Species Shigella flexneri 2a str. 2457T [TaxId:198215] [188611] (1 PDB entry)

8. Domain d3efbd_: 3efb D: [158132]
   Other proteins in same PDB: d3efba1
   automated match to d3efba1
   complexed with acy

Details for d3efbd_

PDB Entry: 3efb, 2 Å

PDB Description: Crystal Structure of Probable sor Operon Regulator from Shigella flexneri

PDB Compounds: (D:) Probable sor-operon regulator

SCOPe Domain Sequences for d3efbd_:

Sequence, based on SEQRES records:

>d3efbd_ c.124.1.8 (D:) automated matches {Shigella flexneri 2a str. 2457T [TaxId: 198215]}
nenlwleqqlkqkfglkdvvvvsgndedeetqlammglhgaqlldrllepgdivgfswgr
avsalvenlpqagqsrqlicvpiiggpsgklesryhvntltysaaaklkgeshladfpal
ldnplirngimqsqhfktisaywdnldialvgigspairdganwhafyggeesddlnarq
vagdicsrffdihgamvetnmsektlsiemnklkqarysigiamseekysgiigalrgky
inclvtnsstaelllk

Sequence, based on observed residues (ATOM records):

>d3efbd_ c.124.1.8 (D:) automated matches {Shigella flexneri 2a str. 2457T [TaxId: 198215]}
nenlwleqqlkqkfglkdvvvvsgedeetqlammglhgaqlldrllepgdivgfswgrav
salvenlpqagqsrqlicvpiiggpsgklesryhvntltysaaaklkgeshladfpalld
nplirngimqsqhfktisaywdnldialvgigspnwhafyggeesddlnarqvagdicsr
ffdihgamvetnmsektlsiemnklkqarysigiamseekysgiigalrgkyinclvtns
staelllk

Timeline for d3efbd_:

• d3efbd_ first appeared in SCOP 1.75, called d3efbd1
  
• d3efbd_ appears in SCOPe 2.07