SCOPe 2.05: Domain d3dy6b_: 3dy6 B:

Lineage for d3dy6b_ (3dy6 B:)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Peroxisome proliferator-activated receptor delta, PPAR-DELTA [48526] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [48527] (16 PDB entries)

8. Domain d3dy6b_: 3dy6 B: [157936]
   automated match to d1gwxa_
   protein/DNA complex; complexed with dy6, iod

Details for d3dy6b_

PDB Entry: 3dy6, 2.9 Å

PDB Description: PPARdelta complexed with an anthranilic acid partial agonist

PDB Compounds: (B:) Peroxisome proliferator-activated receptor delta

SCOPe Domain Sequences for d3dy6b_:

Sequence, based on SEQRES records:

>d3dy6b_ a.123.1.1 (B:) Peroxisome proliferator-activated receptor delta, PPAR-DELTA {Human (Homo sapiens) [TaxId: 9606]}
dlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwkqlvn
glppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifam
lasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfia
aiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvteh
aqmmqrikktetetslhpllqeiykd

Sequence, based on observed residues (ATOM records):

>d3dy6b_ a.123.1.1 (B:) Peroxisome proliferator-activated receptor delta, PPAR-DELTA {Human (Homo sapiens) [TaxId: 9606]}
dlkafskhiynaylknfnmtkkkarsiltapfvihdietlwqaekglvwglppykeisvh
vfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifamlasivnkdgll
vangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaaiilcgdrpgl
mnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvtehaqmmqrikkte
tetslhpllqeiykd

Timeline for d3dy6b_:

• d3dy6b_ first appeared in SCOP 1.75, called d3dy6b1
  
• d3dy6b_ appears in SCOPe 2.04
  
• d3dy6b_ appears in SCOPe 2.06
  
• d3dy6b_ appears in the current release, SCOPe 2.08