Lineage for d3dwkd1 (3dwk D:73-292)

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1887016Fold d.2: Lysozyme-like [53954] (1 superfamily)
    common alpha+beta motif for the active site region
  4. 1887017Superfamily d.2.1: Lysozyme-like [53955] (12 families) (S)
  5. 1888885Family d.2.1.10: PBP transglycosylase domain-like [159832] (3 proteins)
    Pfam PF00912; lacking the characteristic beta-sheet; otherwise has a similar fold to the Family 19 glycosidase
  6. 1888890Protein Penicillin-binding protein 2, PBP2 [159835] (1 species)
  7. 1888891Species Staphylococcus aureus [TaxId:1280] [159836] (3 PDB entries)
    Uniprot Q2YY56 67-292
  8. 1888898Domain d3dwkd1: 3dwk D:73-292 [157919]
    Other proteins in same PDB: d3dwka2, d3dwkb2, d3dwkc2, d3dwkd2
    automated match to d2olva1
    complexed with lda, so4

Details for d3dwkd1

PDB Entry: 3dwk (more details), 3.1 Å

PDB Description: identification of dynamic structural motifs involved in peptidoglycan glycosyltransfer
PDB Compounds: (D:) Penicillin-binding protein 2

SCOPe Domain Sequences for d3dwkd1:

Sequence, based on SEQRES records: (download)

>d3dwkd1 d.2.1.10 (D:73-292) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]}

Sequence, based on observed residues (ATOM records): (download)

>d3dwkd1 d.2.1.10 (D:73-292) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]}

SCOPe Domain Coordinates for d3dwkd1:

Click to download the PDB-style file with coordinates for d3dwkd1.
(The format of our PDB-style files is described here.)

Timeline for d3dwkd1: