SCOPe 2.03: Domain d3dwka1: 3dwk A:71-290

Lineage for d3dwka1 (3dwk A:71-290)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.2: Lysozyme-like [53954] (1 superfamily)
   common alpha+beta motif for the active site region

4. Superfamily d.2.1: Lysozyme-like [53955] (12 families)

5. Family d.2.1.10: PBP transglycosylase domain-like [159832] (3 proteins)
   Pfam PF00912; lacking the characteristic beta-sheet; otherwise has a similar fold to the Family 19 glycosidase

6. Protein Penicillin-binding protein 2, PBP2 [159835] (1 species)

7. Species Staphylococcus aureus [TaxId:1280] [159836] (3 PDB entries)
   Uniprot Q2YY56 67-292

8. Domain d3dwka1: 3dwk A:71-290 [157913]
   Other proteins in same PDB: d3dwka2, d3dwkb2, d3dwkc2, d3dwkd2
   automatically matched to 2OLV A:67-292
   complexed with lda, so4

Details for d3dwka1

PDB Entry: 3dwk, 3.1 Å

PDB Description: identification of dynamic structural motifs involved in peptidoglycan glycosyltransfer

PDB Compounds: (A:) Penicillin-binding protein 2

SCOPe Domain Sequences for d3dwka1:

Sequence, based on SEQRES records:

>d3dwka1 d.2.1.10 (A:71-290) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]}
dpipakiydkngelvktldngqrhehvnlkdvpksmkdavlatednrfyehgaldykrlf
gaigknltggfgsegastltqqvvkdaflsqhksigrkaqeaylsyrleqeyskddifqv
ylnkiyysdgvtgikaaakyyfnkdlkdlnlaeeaylaglpqvpnnyniydhpkaaedrk
ntvlylmhyhkritdkqwedakkidlkanlvnrtpeerqn

Sequence, based on observed residues (ATOM records):

>d3dwka1 d.2.1.10 (A:71-290) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]}
dpipakiydkngelvktldngqrhehvnlkdvpksmkdavlatednrfyehgaldykrlf
gstltqqvvkdaflsigrkaqeaylsyrleqeyskddifqvylnkiyysdgvtgikaaak
yyfnkdlkdlnlaeeaylaglpqvpnnyniydhpkaaedrkntvlylmhyhkritdkqwe
dakkidlkanlvnrtpeerqn

Timeline for d3dwka1:

• d3dwka1 first appeared in SCOP 1.75
  
• d3dwka1 appears in SCOPe 2.02
  
• d3dwka1 appears in SCOPe 2.04
  
• d3dwka1 appears in the current release, SCOPe 2.08