Lineage for d3dvnx2 (3dvn X:1-73)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2158220Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2158221Family d.15.1.1: Ubiquitin-related [54237] (39 protein domains)
    Pfam PF00240
  6. 2158454Protein Ubiquitin [54238] (7 species)
  7. 2158532Species Human (Homo sapiens) [TaxId:9606] [54239] (166 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2158721Domain d3dvnx2: 3dvn X:1-73 [157904]
    Other proteins in same PDB: d3dvna1, d3dvna2, d3dvnb1, d3dvnb2, d3dvnh1, d3dvnh2, d3dvnl1, d3dvnl2, d3dvnu3, d3dvnx3
    automated match to d1aara_

Details for d3dvnx2

PDB Entry: 3dvn (more details), 2.7 Å

PDB Description: Crystal structure of K63-specific fab Apu2.16 bound to K63-linked di-ubiquitin
PDB Compounds: (X:) Ubiquitin D77

SCOPe Domain Sequences for d3dvnx2:

Sequence; same for both SEQRES and ATOM records: (download)

>d3dvnx2 d.15.1.1 (X:1-73) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d3dvnx2:

Click to download the PDB-style file with coordinates for d3dvnx2.
(The format of our PDB-style files is described here.)

Timeline for d3dvnx2: